Orange Bioinformatics add-on for Orange data mining software package.
Project description
Orange3 Bioinformatics
Orange Bioinformatics provides access to publicly available data, like GEO data sets, GO and KEGG. It enables gene enrichment analysis, clustering, classification, gene identification and provides several common visualizations. All features can be combined with other widgets from the Orange data mining framework. See documentation.
Features
Data access
- access to GEO data sets
- access to GO database
- access to KEGG pathways database
Bioinformatics analysis
- plot differential gene expression
- visualize diagrams of molecular interactions, reactions, and relations
- enrich gene sets
- cluster analysis
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