Orange Bioinformatics add-on for Orange data mining software package.

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  • License: GNU General Public License v3 or later (GPLv3+) (GPL3+)
  • Author: Bioinformatics Laboratory, FRI UL
  • Maintainer: Jaka Kokosar
  • Tags orange3, add-on
  • Requires: Python >=3.6
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Project description

Orange3 Bioinformatics

Orange Bioinformatics provides access to publicly available data, like GEO data sets, GO and KEGG. It enables gene enrichment analysis, clustering, classification, gene identification and provides several common visualizations. All features can be combined with other widgets from the Orange data mining framework. See documentation.

Features

Data access

  • access to GEO data sets
  • access to GO database
  • access to KEGG pathways database

Bioinformatics analysis

  • plot differential gene expression
  • visualize diagrams of molecular interactions, reactions, and relations
  • enrich gene sets
  • cluster analysis

Project details

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Avatar for Anze.Staric from gravatar.com Anze.Staric Avatar for biolab-helper from gravatar.com biolab-helper Avatar for jkokosar from gravatar.com jkokosar Avatar for lenatr99 from gravatar.com lenatr99 Avatar for markotoplak from gravatar.com markotoplak

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: GNU General Public License v3 or later (GPLv3+) (GPL3+)
  • Author: Bioinformatics Laboratory, FRI UL
  • Maintainer: Jaka Kokosar
  • Tags orange3, add-on
  • Requires: Python >=3.6
Classifiers

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4.8.4

This version

4.8.3

4.8.2

4.8.1

4.8.0

4.7.2

4.7.1

4.7.0

4.6.0

4.5.0

4.4.0

4.3.1

4.3.0

4.2.0

4.1.0

4.1.0a1 pre-release

4.0.0

4.0.0a1 pre-release

3.5.0

3.4.0

3.3.0

3.2.7

3.2.6

3.2.5

3.2.4

3.2.3

3.2.2

3.2.1

3.2.0

3.1.1

3.1.0

3.0.9

3.0.8

3.0.7

3.0.6

3.0.5

3.0.4

3.0.3

3.0.2

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