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An extension of the Arcana framework to apply workflows and analyses on data stored within XNAT data repositories

Project description

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An extension of the Arcana framework to enable users to apply workflows and analyses on data stored within XNAT data repositories and deploy pipelines to the XNAT Container Service.

The extension module provides the following classes

  • Xnat data store for accessing data via REST API (only)

  • XnatViaCS data store for accessing data in the XNAT archive directly when running within the XNAT Container Service

  • XnatApp container image class, for building Docker images that can be installed, ready-to-go, in the XNAT Container Service

Quick Installation

This extension can be installed for Python 3 using pip:

$ pip3 install arcana-xnat

This will also install the core Arcana package and any required dependencies.

License

This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License

Creative Commons License: Attribution-NonCommercial-ShareAlike 4.0 International

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