A wrapper around NumPy and other array libraries to make them compatible with the Array API standard
Project description
Array API compatibility library
This is a small wrapper around common array libraries that is compatible with the Array API standard. Currently, NumPy, CuPy, and PyTorch are supported. If you want support for other array libraries, or if you encounter any issues, please open an issue.
Note that some of the functionality in this library is backwards incompatible with the corresponding wrapped libraries. The end-goal is to eventually make each array library itself fully compatible with the array API, but this requires making backwards incompatible changes in many cases, so this will take some time.
Currently all libraries here are implemented against the 2022.12 version of the standard.
Install
array-api-compat
is available on both PyPI
python -m pip install array-api-compat
and Conda-forge
conda install --channel conda-forge array-api-compat
Usage
The typical usage of this library will be to get the corresponding array API
compliant namespace from the input arrays using array_namespace()
, like
def your_function(x, y):
xp = array_api_compat.array_namespace(x, y)
# Now use xp as the array library namespace
return xp.mean(x, axis=0) + 2*xp.std(y, axis=0)
If you wish to have library-specific code-paths, you can import the corresponding wrapped namespace for each library, like
import array_api_compat.numpy as np
import array_api_compat.cupy as cp
import array_api_compat.torch as torch
Each will include all the functions from the normal NumPy/CuPy/PyTorch namespace, except that functions that are part of the array API are wrapped so that they have the correct array API behavior. In each case, the array object used will be the same array object from the wrapped library.
Difference between array_api_compat
and numpy.array_api
numpy.array_api
is a strict minimal implementation of the Array API (see
NEP 47). For
example, numpy.array_api
does not include any functions that are not part of
the array API specification, and will explicitly disallow behaviors that are
not required by the spec (e.g., cross-kind type
promotions).
(cupy.array_api
is similar to numpy.array_api
)
array_api_compat
, on the other hand, is just an extension of the
corresponding array library namespaces with changes needed to be compliant
with the array API. It includes all additional library functions not mentioned
in the spec, and allows any library behaviors not explicitly disallowed by it,
such as cross-kind casting.
In particular, unlike numpy.array_api
, this package does not use a separate
Array
object, but rather just uses the corresponding array library array
objects (numpy.ndarray
, cupy.ndarray
, torch.Tensor
, etc.) directly. This
is because those are the objects that are going to be passed as inputs to
functions by end users. This does mean that a few behaviors cannot be wrapped
(see below), but most of the array API functional, so this does not affect
most things.
Array consuming library authors coding against the array API may wish to test
against numpy.array_api
to ensure they are not using functionality outside
of the standard, but prefer this implementation for the default behavior for
end-users.
Helper Functions
In addition to the wrapped library namespaces and functions in the array API specification, there are several helper functions included here that aren't part of the specification but which are useful for using the array API:
-
is_array_api_obj(x)
: ReturnTrue
ifx
is an array API compatible array object. -
array_namespace(*xs)
: Get the corresponding array API namespace for the arraysxs
. For example, if the arrays are NumPy arrays, the returned namespace will bearray_api_compat.numpy
. Note that this function will also work for namespaces that aren't supported by this compat library but which do support the array API (i.e., arrays that have the__array_namespace__
attribute). -
device(x)
: Equivalent tox.device
in the array API specification. Included becausenumpy.ndarray
does not include thedevice
attribute and this library does not wrap or extend the array object. Note that for NumPy,device(x)
is always"cpu"
. -
to_device(x, device, /, *, stream=None)
: Equivalent tox.to_device
. Included because neither NumPy's, CuPy's, nor PyTorch's array objects include this method. For NumPy, this function effectively does nothing since the only supported device is the CPU, but for CuPy, this method supports CuPy CUDA Device and Stream objects. For PyTorch, this is the same asx.to(device)
(thestream
argument is not supported in PyTorch). -
size(x)
: Equivalent tox.size
, i.e., the number of elements in the array. Included because PyTorch'sTensor
definessize
as a method which returns the shape, and this cannot be wrapped because this compat library doesn't wrap or extend the array objects.
Known Differences from the Array API Specification
There are some known differences between this library and the array API specification:
NumPy and CuPy
-
The array methods
__array_namespace__
,device
(for NumPy),to_device
, andmT
are not defined. This reusesnp.ndarray
andcp.ndarray
and we don't want to monkeypatch or wrap it. The helper functionsdevice()
andto_device()
are provided to work around these missing methods (see above).x.mT
can be replaced withxp.linalg.matrix_transpose(x)
.array_namespace(x)
should be used instead ofx.__array_namespace__
. -
Value-based casting for scalars will be in effect unless explicitly disabled with the environment variable
NPY_PROMOTION_STATE=weak
ornp._set_promotion_state('weak')
(requires NumPy 1.24 or newer, see NEP 50 and https://github.com/numpy/numpy/issues/22341) -
asarray()
does not supportcopy=False
. -
Functions which are not wrapped may not have the same type annotations as the spec.
-
Functions which are not wrapped may not use positional-only arguments.
The minimum supported NumPy version is 1.21. However, this older version of NumPy has a few issues:
unique_*
will not compare nans as unequal.finfo()
has nosmallest_normal
.- No
from_dlpack
or__dlpack__
. argmax()
andargmin()
do not havekeepdims
.qr()
doesn't support matrix stacks.asarray()
doesn't supportcopy=True
(as noted above,copy=False
is not supported even in the latest NumPy).- Type promotion behavior will be value based for 0-D arrays (and there is no
NPY_PROMOTION_STATE=weak
to disable this).
If any of these are an issue, it is recommended to bump your minimum NumPy version.
PyTorch
-
Like NumPy/CuPy, we do not wrap the
torch.Tensor
object. It is missing the__array_namespace__
andto_device
methods, so the corresponding helper functionsarray_namespace()
andto_device()
in this library should be used instead (see above). -
The
x.size
attribute ontorch.Tensor
is a function that behaves differently fromx.size
in the spec. Use thesize(x)
helper function as a portable workaround (see above). -
PyTorch does not have unsigned integer types other than
uint8
, and no attempt is made to implement them here. -
PyTorch has type promotion semantics that differ from the array API specification for 0-D tensor objects. The array functions in this wrapper library do work around this, but the operators on the Tensor object do not, as no operators or methods on the Tensor object are modified. If this is a concern, use the functional form instead of the operator form, e.g.,
add(x, y)
instead ofx + y
. -
unique_all()
is not implemented, due to the fact thattorch.unique
does not support returning theindices
array. The otherunique_*
functions are implemented. -
Slices do not support negative steps.
-
The
stream
argument of theto_device()
helper (see above) is not supported. -
As with NumPy, type annotations and positional-only arguments may not exactly match the spec for functions that are not wrapped at all.
The minimum supported PyTorch version is 1.13.
Vendoring
This library supports vendoring as an installation method. To vendor the
library, simply copy array_api_compat
into the appropriate place in the
library, like
cp -R array_api_compat/ mylib/vendored/array_api_compat
You may also rename it to something else if you like (nowhere in the code references the name "array_api_compat").
Alternatively, the library may be installed as dependency on PyPI.
Implementation Notes
As noted before, the goal of this library is to reuse the NumPy and CuPy array
objects, rather than wrapping or extending them. This means that the functions
need to accept and return np.ndarray
for NumPy and cp.ndarray
for CuPy.
Each namespace (array_api_compat.numpy
, array_api_compat.cupy
, and
array_api_compat.torch
) is populated with the normal library namespace (like
from numpy import *
). Then specific functions are replaced with wrapped
variants.
Since NumPy and CuPy are nearly identical in behavior, most wrapping logic can
be shared between them. Wrapped functions that have the same logic between
NumPy and CuPy are in array_api_compat/common/
.
These functions are defined like
# In array_api_compat/common/_aliases.py
def acos(x, /, xp):
return xp.arccos(x)
The xp
argument refers to the original array namespace (either numpy
or
cupy
). Then in the specific array_api_compat/numpy/
and
array_api_compat/cupy/
namespaces, the @get_xp
decorator is applied to
these functions, which automatically removes the xp
argument from the
function signature and replaces it with the corresponding array library, like
# In array_api_compat/numpy/_aliases.py
from ..common import _aliases
import numpy as np
acos = get_xp(np)(_aliases.acos)
This acos
now has the signature acos(x, /)
and calls numpy.arccos
.
Similarly, for CuPy:
# In array_api_compat/cupy/_aliases.py
from ..common import _aliases
import cupy as cp
acos = get_xp(cp)(_aliases.acos)
Since NumPy and CuPy are nearly identical in their behaviors, this allows writing the wrapping logic for both libraries only once.
PyTorch uses a similar layout in array_api_compat/torch/
, but it differs
enough from NumPy/CuPy that very few common wrappers for those libraries are
reused.
See https://numpy.org/doc/stable/reference/array_api.html for a full list of changes from the base NumPy (the differences for CuPy are nearly identical). A corresponding document does not yet exist for PyTorch, but you can examine the various comments in the implementation to see what functions and behaviors have been wrapped.
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