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Azure Data Lake Store Filesystem Client Library for Python

Project description

Microsoft Azure Data Lake Store Filesystem Library for Python
=============================================================

.. image:: https://travis-ci.org/Azure/azure-data-lake-store-python.svg?branch=dev
:target: https://travis-ci.org/Azure/azure-data-lake-store-python
.. image:: https://coveralls.io/repos/github/Azure/azure-data-lake-store-python/badge.svg?branch=master
:target: https://coveralls.io/github/Azure/azure-data-lake-store-python?branch=master

This project is the Python filesystem library for Azure Data Lake Store.

INSTALLATION
============

To install from source instead of pip (for local testing and development):

.. code-block:: bash

> pip install -r dev_requirements.txt
> python setup.py develop

Usage: Sample Code
==================

To play with the code, here is a starting point:

.. code-block:: python

from azure.datalake.store import core, lib, multithread
token = lib.auth(tenant_id, username, password)
adl = core.AzureDLFileSystem(token, store_name=store_name)

# typical operations
adl.ls('')
adl.ls('tmp/', detail=True)
adl.ls('tmp/', detail=True, invalidate_cache=True)
adl.cat('littlefile')
adl.head('gdelt20150827.csv')

# file-like object
with adl.open('gdelt20150827.csv', blocksize=2**20) as f:
print(f.readline())
print(f.readline())
print(f.readline())
# could have passed f to any function requiring a file object:
# pandas.read_csv(f)

with adl.open('anewfile', 'wb') as f:
# data is written on flush/close, or when buffer is bigger than
# blocksize
f.write(b'important data')

adl.du('anewfile')

# recursively download the whole directory tree with 5 threads and
# 16MB chunks
multithread.ADLDownloader(adl, "", 'my_temp_dir', 5, 2**24)

Progress can be tracked using a callback function in the form `track(current, total)`
When passed, this will keep track of transferred bytes and be called on each complete chunk.

Here's an example using the Azure CLI progress controller as the `progress_callback`:

.. code-block:: python

from cli.core.application import APPLICATION

def _update_progress(current, total):
hook = APPLICATION.get_progress_controller(det=True)
hook.add(message='Alive', value=current, total_val=total)
if total == current:
hook.end()

...
ADLUploader(client, destination_path, source_path, thread_count, overwrite=overwrite,
chunksize=chunk_size,
buffersize=buffer_size,
blocksize=block_size,
progress_callback=_update_progress)

This will output a progress bar to the stdout:

.. code-block:: bash

Alive[######################### ] 40.0881%

Finished[#############################################################] 100.0000%

Usage: Command Line Sample
==========================

To interact with the API at a higher-level, you can use the provided
command-line interface in "samples/cli.py". You will need to set
the appropriate environment variables

* :code:`azure_username`

* :code:`azure_password`

* :code:`azure_data_lake_store_name`

* :code:`azure_subscription_id`

* :code:`azure_resource_group_name`

* :code:`azure_service_principal`

* :code:`azure_service_principal_secret`

to connect to the Azure Data Lake Store. Optionally, you may need to define :code:`azure_tenant_id` or :code:`azure_data_lake_store_url_suffix`.

Below is a simple sample, with more details beyond.


.. code-block:: bash

python samples\cli.py ls -l

Execute the program without arguments to access documentation.

To start the CLI in interactive mode, run "python samples/cli.py"
and then type "help" to see all available commands (similiar to Unix utilities):

.. code-block:: bash

> python samples/cli.py
azure> help

Documented commands (type help <topic>):
========================================
cat chmod close du get help ls mv quit rmdir touch
chgrp chown df exists head info mkdir put rm tail

azure>


While still in interactive mode, you can run "ls -l" to list the entries in the
home directory ("help ls" will show the command's usage details). If you're not
familiar with the Unix/Linux "ls" command, the columns represent 1) permissions,
2) file owner, 3) file group, 4) file size, 5-7) file's modification time, and
8) file name.

.. code-block:: bash

> python samples/cli.py
azure> ls -l
drwxrwx--- 0123abcd 0123abcd 0 Aug 02 12:44 azure1
-rwxrwx--- 0123abcd 0123abcd 1048576 Jul 25 18:33 abc.csv
-r-xr-xr-x 0123abcd 0123abcd 36 Jul 22 18:32 xyz.csv
drwxrwx--- 0123abcd 0123abcd 0 Aug 03 13:46 tmp
azure> ls -l --human-readable
drwxrwx--- 0123abcd 0123abcd 0B Aug 02 12:44 azure1
-rwxrwx--- 0123abcd 0123abcd 1M Jul 25 18:33 abc.csv
-r-xr-xr-x 0123abcd 0123abcd 36B Jul 22 18:32 xyz.csv
drwxrwx--- 0123abcd 0123abcd 0B Aug 03 13:46 tmp
azure>


To download a remote file, run "get remote-file [local-file]". The second
argument, "local-file", is optional. If not provided, the local file will be
named after the remote file minus the directory path.

.. code-block:: bash

> python samples/cli.py
azure> ls -l
drwxrwx--- 0123abcd 0123abcd 0 Aug 02 12:44 azure1
-rwxrwx--- 0123abcd 0123abcd 1048576 Jul 25 18:33 abc.csv
-r-xr-xr-x 0123abcd 0123abcd 36 Jul 22 18:32 xyz.csv
drwxrwx--- 0123abcd 0123abcd 0 Aug 03 13:46 tmp
azure> get xyz.csv
2016-08-04 18:57:48,603 - ADLFS - DEBUG - Creating empty file xyz.csv
2016-08-04 18:57:48,604 - ADLFS - DEBUG - Fetch: xyz.csv, 0-36
2016-08-04 18:57:49,726 - ADLFS - DEBUG - Downloaded to xyz.csv, byte offset 0
2016-08-04 18:57:49,734 - ADLFS - DEBUG - File downloaded (xyz.csv -> xyz.csv)
azure>


It is also possible to run in command-line mode, allowing any available command
to be executed separately without remaining in the interpreter.

For example, listing the entries in the home directory:

.. code-block:: bash

> python samples/cli.py ls -l
drwxrwx--- 0123abcd 0123abcd 0 Aug 02 12:44 azure1
-rwxrwx--- 0123abcd 0123abcd 1048576 Jul 25 18:33 abc.csv
-r-xr-xr-x 0123abcd 0123abcd 36 Jul 22 18:32 xyz.csv
drwxrwx--- 0123abcd 0123abcd 0 Aug 03 13:46 tmp
>


Also, downloading a remote file:

.. code-block:: bash

> python samples/cli.py get xyz.csv
2016-08-04 18:57:48,603 - ADLFS - DEBUG - Creating empty file xyz.csv
2016-08-04 18:57:48,604 - ADLFS - DEBUG - Fetch: xyz.csv, 0-36
2016-08-04 18:57:49,726 - ADLFS - DEBUG - Downloaded to xyz.csv, byte offset 0
2016-08-04 18:57:49,734 - ADLFS - DEBUG - File downloaded (xyz.csv -> xyz.csv)
>

Tests
=====

For detailed documentation about our test framework, please visit the
`tests folder <https://github.com/Azure/azure-data-lake-store-python/tree/master/tests>`__.

Need Help?
==========

Be sure to check out the Microsoft Azure `Developer Forums on Stack Overflow <http://go.microsoft.com/fwlink/?LinkId=234489>`__
if you have trouble with the provided code. Most questions are tagged `azure and python <https://stackoverflow.com/questions/tagged/azure+python>`__.


Contribute Code or Provide Feedback
===================================

If you would like to become an active contributor to this project please
follow the instructions provided in `Microsoft Azure Projects Contribution Guidelines <http://azure.github.io/guidelines/>`__.
Furthermore, check out `GUIDANCE.md <https://github.com/Azure/azure-data-lake-store-python/blob/master/GUIDANCE.md>`__
for specific information related to this project.

If you encounter any bugs with the library please file an issue in the
`Issues <https://github.com/Azure/azure-data-lake-store-python/issues>`__
section of the project.


Code of Conduct
===============
This project has adopted the `Microsoft Open Source Code of Conduct <https://opensource.microsoft.com/codeofconduct/>`__.
For more information see the `Code of Conduct FAQ <https://opensource.microsoft.com/codeofconduct/faq/>`__ or contact
`opencode@microsoft.com <mailto:opencode@microsoft.com>`__ with any additional questions or comments.


.. :changelog:

Release History
===============

0.0.28 (2018-08-020)
+++++++++++++++++++
* Added recovery from DatalakeBadOffsetException

0.0.27 (2018-08-08)
+++++++++++++++++++
* Fixed bug in single file check
* Added Python2 exception compatibility

0.0.26 (2018-08-03)
+++++++++++++++++++
* Fixed bug due to not importing errno
* Fixed bug in os.makedirs race condition
* Updated Readme with correct environment variables and fixed some links

0.0.25 (2018-07-26)
+++++++++++++++++++
* Fixed downloading of empty directories and download of directory structure with only a single file

0.0.24 (2018-07-16)
+++++++++++++++++++
* Retry policy implemented for all operations, default being Exponential Retry Policy

0.0.23 (2018-07-11)
+++++++++++++++++++
* Fixed the incorrect download location in case of UNC local paths

0.0.22 (2018-06-02)
+++++++++++++++++++
* Encoding filepaths in URI

0.0.21 (2018-06-01)
+++++++++++++++++++
* Remove unused msrest dependency

0.0.20 (2018-05-25)
+++++++++++++++++++
* Compatibility of the sdist with wheel 0.31.0

0.0.19 (2018-03-14)
-------------------
* Fixed upload issue where destination filename was wrong while upload of directory with single file #208

0.0.18 (2018-02-05)
-------------------
* Fixed read issue where whole file was cached while doing positional reads #198
* Fixed readline as well for the same

0.0.17 (2017-09-21)
-------------------
* Fixed README.rst indentation error
* Changed management endpoint

0.0.16 (2017-09-11)
-------------------
* Fixed Multi chunk transfer hangs as merging chunks fails #187
* Added syncflag and leaseid in create, append calls.
* Added filesessionid in create, append and open calls.

0.0.15 (2017-07-26)
-------------------
* Enable Data Lake Store progress controller callback #174
* Fix File state incorrectly marked as "errored" if contains chunks is "pending" state #182
* Fix Race condition due to `transfer` future `done_callback` #177

0.0.14 (2017-07-10)
-------------------
* Fix an issue where common prefixes in paths for upload and download were collapsed into only unique paths.

0.0.13 (2017-06-28)
-------------------
* Add support for automatic refreshing of service principal credentials

0.0.12 (2017-06-20)
-------------------
* Fix a regression with ls returning the top level folder if it has no contents. It now properly returns an empty array if a folder has no children.

0.0.11 (2017-06-02)
-------------------
* Update to name incomplete file downloads with a `.inprogress` suffix. This suffix is removed when the download completes successfully.

0.0.10 (2017-05-24)
-------------------
* Allow users to explicitly use or invalidate the internal, local cache of the filesystem that is built up from previous `ls` calls. It is now set to always call the service instead of the cache by default.
* Update to properly create the wheel package during build to ensure all pip packages are available.
* Update folder upload/download to properly throw early in the event that the destination files exist and overwrite was not specified. NOTE: target folder existence (or sub folder existence) does not automatically cause failure. Only leaf node existence will result in failure.
* Fix a bug that caused file not found errors when attempting to get information about the root folder.

0.0.9 (2017-05-09)
------------------
* Enforce basic SSL utilization to ensure performance due to `GitHub issue 625 <https://github.com/pyca/pyopenssl/issues/625>`

0.0.8 (2017-04-26)
------------------
* Fix server-side throttling retry support. This is not a guarantee that if the server is throttling the upload (or download) it will eventually succeed, but there is now a back-off retry in place to make it more likely.

0.0.7 (2017-04-19)
------------------
* Update the build process to more efficiently handle multi-part namespaces for pip.

0.0.6 (2017-03-15)
------------------
* Fix an issue with path caching that should drastically improve performance for download

0.0.5 (2017-03-01)
------------------
* Fix for downloader to ensure there is access to the source path before creating destination files
* Fix for credential objects to inherit from msrest.authentication for more universal authentication support
* Add support for the following:

* set_expiry: allows for setting expiration on files
* ACL management:

* set_acl: allows for the full replacement of an ACL on a file or folder
* set_acl_entries: allows for "patching" an existing ACL on a file or folder
* get_acl_status: retrieves the ACL information for a file or folder
* remove_acl_entries: removes the specified entries from an ACL on a file or folder
* remove_acl: removes all non-default ACL entries from a file or folder
* remove_default_acl: removes all default ACL entries from a folder

* Remove unsupported and unused "TRUNCATE" operation.
* Added API-Version support with a default of the latest api version (2016-11-01)

0.0.4 (2017-02-07)
------------------
* Fix for folder upload to properly delete folders with contents when overwrite specified.
* Fix to set verbose output to False/Off by default. This removes progress tracking output by default but drastically improves performance.

0.0.3 (2017-02-02)
------------------
* Fix to setup.py to include the HISTORY.rst file. No other changes

0.0.2 (2017-01-30)
------------------
* Addresses an issue with lib.auth() not properly defaulting to 2FA
* Fixes an issue with Overwrite for ADLUploader sometimes not being honored.
* Fixes an issue with empty files not properly being uploaded and resulting in a hang in progress tracking.
* Addition of a samples directory showcasing examples of how to use the client and upload and download logic.
* General cleanup of documentation and comments.
* This is still based on API version 2016-11-01

0.0.1 (2016-11-21)
------------------
* Initial preview release. Based on API version 2016-11-01.
* Includes initial ADLS filesystem functionality and extended upload and download support.


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