A utility for loading data from repositories of BEL documents.
Project description
A utility for loading data from repositories of BEL documents with PyBEL [1].
Installation
bel_repository can be installed from PyPI with the following command:
$ pip install bel-repository
The latest version can be installed from GitHub with:
$ pip install git+https://github.com/pybel/bel-repository.git
Usage
from typing import Mapping
from bel_repository import BELRepository
from pybel import BELGraph
# Build a repository by giving a folder
bel_repository = BELRepository('/path/to/folder/with/bel/')
# Get a mapping from paths to graphs
graphs: Mapping[str, BELGraph] = bel_repository.get_graphs()
# Get a combine graph
graph: BELGraph = bel_repository.get_graph()
Example BEL Repositories
Each of these repositories has BEL content that can be pip installed:
More publicly available BEL content can be found in the listing in this blog post.
References
Project details
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