Skip to main content

A package for converting ChEBI to BEL

Project description

Convert the ChEBI ontology and related chemical information to BEL.

Installation Current version on PyPI Stable Supported Python Versions MIT License

bio2bel_chebi can be installed easily from PyPI with the following code in your favorite terminal:

$ python3 -m pip install bio2bel_chebi

or from the latest code on GitHub with:

$ python3 -m pip install git+https://github.com/bio2bel/chebi.git@master

Setup

ChEBI can be downloaded and populated from either the Python REPL or the automatically installed command line utility.

Python REPL

>>> import bio2bel_chebi
>>> chebi_manager = bio2bel_chebi.Manager()
>>> chebi_manager.populate()

Command Line Utility

bio2bel_chebi populate

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

bio2bel_chebi-0.1.2.tar.gz (18.5 kB view details)

Uploaded Source

File details

Details for the file bio2bel_chebi-0.1.2.tar.gz.

File metadata

  • Download URL: bio2bel_chebi-0.1.2.tar.gz
  • Upload date:
  • Size: 18.5 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.11.0 pkginfo/1.4.2 requests/2.19.1 setuptools/39.0.1 requests-toolbelt/0.8.0 tqdm/4.23.0 CPython/3.6.5

File hashes

Hashes for bio2bel_chebi-0.1.2.tar.gz
Algorithm Hash digest
SHA256 660461c59eaab511e78a083bc3c2db00570047c52130aee5d4b16090bff690ec
MD5 b9ff070e34b40af1a79ac0936698fd47
BLAKE2b-256 3664e5a896c346f5d749f49e2f763f89ec1ea0961ffc138d003decf7421e20fc

See more details on using hashes here.

Provenance

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page