A package for converting GO to BEL
Project description
Converts the Gene Ontology (GO) to BEL
Installation
bio2bel_go can be installed easily from PyPI with the following code in your favorite terminal:
$ python3 -m pip install bio2bel_go
or from the latest code on GitHub with:
$ python3 -m pip install git+https://github.com/bio2bel/go.git@master
Setup
GO can be downloaded and populated from either the Python REPL or the automatically installed command line utility.
Python REPL
>>> import bio2bel_go
>>> go_manager = bio2bel_go.Manager()
>>> go_manager.populate()
Command Line Utility
bio2bel_go populate
Citation
Ashburner, M., et al. (2000). Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nature Genetics, 25(1), 25–9.
Links
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
bio2bel_go-0.0.1.tar.gz
(14.6 kB
view hashes)
Built Distribution
bio2bel_go-0.0.1-py3-none-any.whl
(10.4 kB
view hashes)
Close
Hashes for bio2bel_go-0.0.1-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 43a15e8248292cbbb41540a582a5f52c31d55a4e438f0d7fe69a217daa60a01e |
|
MD5 | 318e54b8e8260e8b19407b3b2cbc47fa |
|
BLAKE2b-256 | f9c2977ecd3cca8e3a2e1752b098a05303391429212714211dd9104123c57cb2 |