bio2bel-mirtarbase

A package for converting miRTarBase to BEL

These details have not been verified by PyPI

Project description

Serializes text-mined miRNA-target interactions to BEL

bio2bel_mirtarbase can be installed easily from PyPI with the following code in your favorite terminal:

$ python3 -m pip install bio2bel_mirtarbase

or from the latest code on GitHub with:

$ python3 -m pip install git+https://github.com/bio2bel/mirtarbase.git@master

miRTarBase can be downloaded and populated from either the Python REPL or the automatically installed command line utility.

>>> import bio2bel_mirtarbase
>>> mirtarbase_manager = bio2bel_mirtarbase.Manager()
>>> mirtarbase_manager.populate()

bio2bel_mirtarbase populate

Chih-Hung Chou, et al; miRTarBase 2016: updates to the experimentally validated miRNA-target interactions database. Nucleic Acids Res 2016; 44 (D1): D239-D247. doi: 10.1093/nar/gkv1258

These details have not been verified by PyPI

0.2.2

Apr 16, 2019

0.2.1

Apr 16, 2019

This version

0.2.0

Dec 3, 2018

0.1.2

May 8, 2018

0.1.1

Nov 27, 2017

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Uploaded Dec 3, 2018 Source

Uploaded Dec 3, 2018 Python 3

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