Bio2BEL SIDER.
Project description
Converts the Side Effect Resource (SIDER) to BEL.
Installation
bio2bel_sider can be installed easily from PyPI with the following code in your favorite terminal:
$ python3 -m pip install bio2bel_sider
or from the latest code on GitHub with:
$ python3 -m pip install git+https://github.com/bio2bel/sider.git
Setup
SIDER can be downloaded and populated from either the Python REPL or the automatically installed command line utility.
Python REPL
>>> import bio2bel_sider
>>> sider_manager = bio2bel_sider.Manager()
>>> sider_manager.populate()
Command Line Utility
bio2bel_sider populate
Citations
Kuhn, M., et al. (2016). The SIDER database of drugs and side effects. Nucleic Acids Research, 44(D1), D1075–D1079.
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