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BioMAJ command line tool

Project description

# About

Package to use BioMAJ providing biomaj-cli

# Example

biomaj-cli.py –proxy http://biomaj-public-proxy –api-key XYZ_MYAPIKEY –update –bank Anopheles_gambiae

To get help usage:

biomaj-cli -h

If proxy is not specifed, a monolitic and local BioMAJ installation is expected

To create users, see biomaj-user repo or BioMAJ wiki

3.1.11:

Add –data-list and –data-import to import an example bank (needs biomaj-data package)

3.1.10:

Add –history option

3.1.9:

Add option –stats, needs biomaj-daemon >= 3.0.13 Add option –json, needs biomaj-daemon >= 3.0.13

3.1.8:

Add option –schedule

3.1.7:

If no arg given, display help

3.1.6:

Add options –last-log and –tail to get last log of a bank, needs biomaj-daemon >= 3.0.8

3.1.5:

Add missing biomaj-core req

3.1.4:

Add whatsup option Fix default value for –config

3.1.2:

Add missing README Fix for monolithic usage

3.1.1:

Use biomaj daemon utils for options management Fix config setup when using local install Rename biomaj-daemon-cli to biomaj-cli

3.1.0:

Create client for biomaj with micro services

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