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BioMAJ core library

Project description

# Biomaj

Biomaj core library

Properties can be overriden by environment variables with pattern BIOMAJ_X_Y_Z for property x.y.z

Example:

use BIOMAJ_LDAP_HOST for ldap.host

[![PyPI version](https://badge.fury.io/py/biomaj-core.svg)](https://badge.fury.io/py/biomaj-core)

3.0.19:

Add ftps and directftps protocols #4 Harden hardlinks copy_files_with_regexp: remove duplicates Add utils fonctions Code cleanup

3.0.18:

Allow to use hardlinks in copy_files and copy_files_with_regexp

3.0.17:

Fix –log option

3.0.16:

Add some warnings if some file is missing

3.0.15:

Fix check on bank properties config file when args is empty vs not defined

3.0.14:

Fix checks on local_endpoint_XXX in config.yml In rabbitmq not defined on config.yml add an empty dict

3.0.13:

Add archive integrity checks

3.0.12:

Add irods support

3.0.11:

Add get_module_version static method, checks module version and latest version on pypi Allow .args fo process to be empty

3.0.10:

Add env variables WEB_LOCAL_ENDPOINT_XX with XX as a service (defined in utils.py Utils.services) to define an endpoint per service

3.0.9:

#1 Add checks on bank properties

3.0.8:

Add DOCKER_URL, MONGO_URL, MONGO_DB env variable in override Do not fail on elasticsearch index creation, just log Add rsync check

3.0.7:

set logging only if necessary

3.0.6:

Fix configparser import for python 2 vs 3

3.0.5:

Add config override with env variables

3.0.4:

Code cleanup

3.0.3:

Put index management in core

3.0.2:

Add missing deps

3.0.1:

Add README etc..

3.0.0:

separation of biomaj and biomaj_core

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