Skip to main content

design and steer profile likelihood fits

Project description

cabinetry logo

CI status Documentation Status codecov PyPI version python version Code style: black

DOI

cabinetry is a Python library for building and steering binned template fits. It is written with applications in High Energy Physics in mind. cabinetry interfaces many other powerful libraries to make it easy for an analyzer to run their statistical inference pipeline.

Statistical models in HistFactory format can be built by cabinetry from instructions in a declarative configuration. cabinetry makes heavy use of pyhf for statistical inference, and provides additional utilities to help study and disseminate fit results. This includes commonly used visualizations. Due to its modular approach, analyzers are free to use all of cabinetry's functionality or only some pieces. cabinetry can be used for inference and visualization with any pyhf-compatible model, whether it was built with cabinetry or not.

Installation

cabinetry can be installed with pip:

python -m pip install cabinetry

This will only install the minimum requirements for the core part of cabinetry. The following will install additional optional dependencies needed for ROOT file reading:

python -m pip install cabinetry[contrib]

Hello world

To run the following example, first generate the input files via the script util/create_ntuples.py.

import cabinetry

config = cabinetry.configuration.load("config_example.yml")

# create template histograms
cabinetry.template_builder.create_histograms(config)

# perform histogram post-processing
cabinetry.template_postprocessor.run(config)

# build a workspace
ws = cabinetry.workspace.build(config)

# run a fit
model, data = cabinetry.model_utils.model_and_data(ws)
fit_results = cabinetry.fit.fit(model, data)

# visualize the post-fit model prediction and data
model_postfit = cabinetry.model_utils.prediction(model, fit_results=fit_results)
cabinetry.visualize.data_mc(model_postfit, data, config=config)

The above is an abbreviated version of an example included in example.py, which shows how to use cabinetry. It requires additional dependencies obtained with pip install cabinetry[contrib].

Documentation

Find more information in the documentation and tutorial material in the cabinetry-tutorials repository. cabinetry is also described in a paper submitted to vCHEP 2021: 10.5281/zenodo.4627037.

Acknowledgements

NSF-1836650

This work was supported by the U.S. National Science Foundation (NSF) cooperative agreement OAC-1836650 (IRIS-HEP).

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

cabinetry-0.3.0.tar.gz (143.8 kB view details)

Uploaded Source

Built Distribution

cabinetry-0.3.0-py3-none-any.whl (63.0 kB view details)

Uploaded Python 3

File details

Details for the file cabinetry-0.3.0.tar.gz.

File metadata

  • Download URL: cabinetry-0.3.0.tar.gz
  • Upload date:
  • Size: 143.8 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.6.0 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.61.1 CPython/3.8.10

File hashes

Hashes for cabinetry-0.3.0.tar.gz
Algorithm Hash digest
SHA256 9df102e2f23ec309eeed1ff680a16f72ad9f565800807d02f58c7ec21971fc7c
MD5 804799c43b6a7f608dde5a94bf306da1
BLAKE2b-256 787bb6fbdfbd445c8373addf749ba03197a9923f47d5dc152e5958425d484e04

See more details on using hashes here.

File details

Details for the file cabinetry-0.3.0-py3-none-any.whl.

File metadata

  • Download URL: cabinetry-0.3.0-py3-none-any.whl
  • Upload date:
  • Size: 63.0 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.6.0 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.61.1 CPython/3.8.10

File hashes

Hashes for cabinetry-0.3.0-py3-none-any.whl
Algorithm Hash digest
SHA256 faeb5df05ceb9bf9a8ac508df1c39a2525c603e78f69a22b62d8a242f5a84bd6
MD5 cd800f92360d19fb1a4cf9c32262e291
BLAKE2b-256 51ab021ca41e86ae0102590e0314216c48ce1245934c4fbee0191a03699d1d32

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page