Toolbox for non-linear calibration modeling.
Project description
calibr8
This package provides templates and functions for performing likelihood-based calibration modeling. To see implementation examples & excercises, you can go to notebooks/.
Installation
calibr8 is released on PyPI:
pip install calibr8
Documentation
Read the package documentation here.
Usage and Citing
calibr8 is licensed under the GNU Affero General Public License v3.0.
Head over to Zenodo to generate a BibTeX citation for the latest release.
Please cite the paper as:
Helleckes & Osthege et al. (2021). Bayesian calibration, process modeling and uncertainty quantification in biotechnology. bioRxiv. https://doi.org/10.1101/2021.06.30.450546
@article {calibr8,
author = {Helleckes, Laura Marie and Osthege, Michael and Wiechert, Wolfgang and von Lieres, Eric and Oldiges, Marco},
title = {Bayesian calibration, process modeling and uncertainty quantification in biotechnology},
elocation-id = {2021.06.30.450546},
year = {2021},
doi = {10.1101/2021.06.30.450546},
publisher = {Cold Spring Harbor Laboratory},
URL = {https://www.biorxiv.org/content/early/2021/07/03/2021.06.30.450546},
eprint = {https://www.biorxiv.org/content/early/2021/07/03/2021.06.30.450546.full.pdf},
journal = {bioRxiv}
}
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
File details
Details for the file calibr8-6.5.0.tar.gz.
File metadata
- Download URL: calibr8-6.5.0.tar.gz
- Upload date:
- Size: 31.6 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.8.0 pkginfo/1.8.2 readme-renderer/32.0 requests/2.27.1 requests-toolbelt/0.9.1 urllib3/1.26.8 tqdm/4.62.3 importlib-metadata/4.2.0 keyring/23.5.0 rfc3986/2.0.0 colorama/0.4.4 CPython/3.7.12
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 91014ebe196d3c36aa098d5ae9f1e403601218188994708eb25768c2cb649e5e |
|
| MD5 | a17ea7177d77f5c06cf9489eecbec13d |
|
| BLAKE2b-256 | 94bf26ef50dfc4ba803b881422ef688bfa25810e645d8eb0e0cbdbcd440a356e |
Provenance
File details
Details for the file calibr8-6.5.0-py3-none-any.whl.
File metadata
- Download URL: calibr8-6.5.0-py3-none-any.whl
- Upload date:
- Size: 108.5 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.8.0 pkginfo/1.8.2 readme-renderer/32.0 requests/2.27.1 requests-toolbelt/0.9.1 urllib3/1.26.8 tqdm/4.62.3 importlib-metadata/4.2.0 keyring/23.5.0 rfc3986/2.0.0 colorama/0.4.4 CPython/3.7.12
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 45a0a2b1c2af5fa6aabe508be96174b45bee9a098f3b3cbb8ecdd21dad4b5063 |
|
| MD5 | d8cdeca096c357f3e6494c09f29143b1 |
|
| BLAKE2b-256 | 27617002e7f10d18f280877d13d566d3da50141e723e345e0fe3d09d945aa87d |
