Clustering cONtigs with COverage and ComposiTion

Navigation

Verified details

These details have been verified by PyPI
Maintainers
Avatar for alneberg from gravatar.com alneberg

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: FreeBSD
  • Author: Johannes Alneberg
  • Tags Python, Scilifelab, Metagenomics, Binning, Clustering, Contig

Project description

Concoct is a program that combines three types of

information - sequence composition, coverage across multiple sample, and read-pair linkage - to automatically bin metagenomic contigs into genomes.

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for alneberg from gravatar.com alneberg

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: FreeBSD
  • Author: Johannes Alneberg
  • Tags Python, Scilifelab, Metagenomics, Binning, Clustering, Contig

Release history Release notifications | RSS feed

0.4.0

0.3.3

0.3.2

This version

0.3.1

0.3.0

0.2

0.1

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

concoct-0.3.1.tar.gz (20.6 kB view details)

Uploaded Source

File details

Details for the file concoct-0.3.1.tar.gz.

File metadata

  • Download URL: concoct-0.3.1.tar.gz
  • Upload date:
  • Size: 20.6 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No

File hashes

Hashes for concoct-0.3.1.tar.gz
Algorithm Hash digest
SHA256 5b4ebe13bee567be92cc7c3b57f60d1fdea9ded3d428dd7047fdc6b5376ec53a
MD5 55c5881b1d49cf245cfc6715ba64fea9
BLAKE2b-256 02d4efeed6178595fabe9971ff4e9b493ab91b9a99f363c737cdc804e6bb6555

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page