Skip to main content

CRATE: clinical records anonymisation and text extraction

Project description

Purpose

  • Anonymises relational databases.

  • Performs some specific preprocessing tasks; e.g.

    • preprocesses some specific databases (e.g. Servelec RiO EMR).

    • fetches some word lists, e.g. forenames/surnames/eponyms.

  • Provides a natural language processing (NLP) pipeline.

  • Web app for

    • querying the anonymised database

    • managing a consent-to-contact process

Authors

  • Rudolf Cardinal, 2015-.

  • Francesca Spivack, 2018-.

Documentation

See https://egret.psychol.cam.ac.uk/crate

Sources

Licence

  • Copyright (C) 2015-2018 Rudolf Cardinal (rudolf@pobox.com).

  • Licensed under the GNU GPL v3+: see LICENSE file.

  • Some third-party libraries have slightly different licences:

    • aspects of CamAnonGatePipeline.java are based on demonstration GATE code, copyright (C); University of Sheffield, and licensed under the GNU LGPL; see https://gate.ac.uk/.

Project details


Release history Release notifications | RSS feed

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

crate-anon-0.18.63.tar.gz (12.4 MB view details)

Uploaded Source

File details

Details for the file crate-anon-0.18.63.tar.gz.

File metadata

  • Download URL: crate-anon-0.18.63.tar.gz
  • Upload date:
  • Size: 12.4 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.12.1 pkginfo/1.4.2 requests/2.21.0 setuptools/40.6.3 requests-toolbelt/0.8.0 tqdm/4.28.1 CPython/3.5.3

File hashes

Hashes for crate-anon-0.18.63.tar.gz
Algorithm Hash digest
SHA256 39f6f228c0c97d1902c19025c1872fec5158da25c6c91f4bb7b9653e1f3dddf7
MD5 1527adc65cff151a7418878b0606f088
BLAKE2b-256 e426d07cd187a026fddc05ccec177ca3345d6e1c493e5cfe313ca243ff3e7fe5

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page