diffupy 0.0.4

Installation

The latest stable code can be installed from PyPI with:

$ python3 -m pip install diffupy

The most recent code can be installed from the source on GitHub with:

$ python3 -m pip install git+https://github.com/multipaths/DiffuPy.git

For developers, the repository can be cloned from GitHub and installed in editable mode with:

$ git clone https://github.com/multipaths/DiffuPy.git
$ cd diffupy
$ python3 -m pip install -e .

Command Line Interface

The following commands can be used directly from your terminal:

1. Run a diffusion analysis The following command will run a diffusion method on a given network with the given data. More information here.

$ python3 -m diffupy diffuse --network=<path-to-network-file> --data=<path-to-data-file> --method=<method>

2. Generate a kernel with one of the seven methods implemented Generates the regularised Laplacian kernel of a given graph. More information in the documentation.

$ python3 -m diffupy kernel --network=<path-to-network-file>

Disclaimer

DiffuPy is a scientific software that has been developed in an academic capacity, and thus comes with no warranty or guarantee of maintenance, support, or back-up of data.