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Client and tools for ENCODE data submitters.

Project description

© 2019 The Board of Trustees of the Leland Stanford Junior University.

encode_utils

Tools that are useful to any ENCODE Consortium submitting group, as well as the general community working with ENCODE data. Library and scripts are coded in Python.

See the wiki to get started.

API and script documentation are available on Read the Docs.

Latest news

Additions in master (will go into next release):

  • Updated connection.Connection.before_post_file() such that it will calculate file_size now in addition to md5sum. Updated connection.Connection.upload_file() such that whenever the md5sum needs to be set, then file_size will also be set.

Jan. 11, 2019

Release 2.6.0


Nov. 15, 2018

Now available on PyPI with pip install encode-utils.


Nov. 2, 2018

Release 2.5.0


Oct. 11, 2018

Release 2.4.0


Aug 9, 2018

Release 2.3.1. Adds support to transfer from S3 to GCP (see release notes from 2.3.0).


Jun 15, 2018

Release 1.5.2


June 7, 2018

Release 1.5.1


May 21, 2018

Release 1.5.0


May 10, 2018

Release 1.4.1


May 4, 2018

Release 1.4.0.


Apr. 5, 2018

Release 1.3.0.


Apr. 3, 2018

Release 1.2.1.


Mar. 26, 2018

Release 1.2.0.


Feb. 23, 2018

Release 1.1.3.


Feb. 15, 2018

Release 1.1.1.


Feb. 12, 2018

Release 1.0.0.

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