eutils

Structured Python interface to NCBI E-Utilities.

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Project description

eutils (https://bitbucket.org/biocommons/eutils/) is a Python package that facilitates the use of the National Center for Biotechnology Information (NCBI) Eutilities interface. It is conceptually similar to facilities in Biopython and PyCogent, but it differs from those in a few important ways. Features:

Eutils, and nothing else. This reduces the number of dependencies.
Caching and throttling are built-in. (NCBI bans excessive use.)
Aims to provide parsers for all major data types.

Status: eutils is in early development. PubMed, Gene, RefSeq (nucleotide), and dbSNP data are well-represented; others are not represented at all.

Project details

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biocommons jsstevenson korikuzma reece

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Release history Release notifications | RSS feed

0.6.0

Dec 17, 2019

0.5.2

May 15, 2019

0.5.0

Nov 20, 2018

0.5.0rc1 pre-release

Nov 20, 2018

0.4.1

Oct 10, 2018

0.4.0

May 29, 2018

0.3.2

Nov 3, 2017

0.3.1

Aug 23, 2017

0.3.0.post0

Mar 1, 2017

0.2.4.post0

Feb 21, 2017

0.2.4

Feb 21, 2017

0.2.3

Feb 3, 2017

0.2.2

Dec 10, 2016

0.2.1

Oct 20, 2016

0.2.0

Sep 15, 2016

0.1.1

Jul 23, 2016

0.1.0

Feb 16, 2016

This version

0.1.0a3 pre-release

Aug 13, 2015

0.1.0a1 pre-release

Aug 10, 2015

0.0.9

Jan 26, 2015

0.0.8

Sep 24, 2014

0.0.5

Mar 5, 2014

0.0.3

Feb 15, 2014

0.0.2

Jan 20, 2014

0.0.1

Jan 20, 2014

0.0.0

Jan 15, 2014

0.0.8dev-9d2a4b1ac188 pre-release

May 10, 2014

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