API for graphs and tasks in Ewoks
Project description
EwoksCore: API for graphs and tasks in Ewoks
Workflow definition
A workflow is a directed graph of tasks. A directed graph consists of nodes and links.
A node describes an opaque unit of execution with a signature. It can have positional and named arguments which can be required or optional. It can have zero, one or more named outputs.
A task is an opaque unit of execution with input arguments defined by links and static values in the graph representation. (OOP analogy: a task is a node instance).
A link connects a source node to a target node. A link can have the following properties:
- conditional: has a set of statements that combined are either True or False
- required: either marked as “required” in the graph representation or “unconditional and all ancestors of the source node are required”
- arguments: a mapping from input arguments of the target to output arguments of the source.
Task scheduling
A task can only be executed when all required predecessors have been executed successfully.
Task scheduling starts by executing all start tasks. When a graph has nodes without predecessors, those are the start tasks. Otherwise all nodes without required predecessors and with all required arguments statically defined are start nodes.
The input arguments of a task are defined in the following order of priority:
- Input from non-required predecessors (we allow maximum one of those)
- Input from all unconditional links (argument collisions raise an exception)
- Input from the graph representation (static input)
Workflow description
Ewoks describes workflows as a list of nodes and a list of links
{
"nodes": [{"id": "nodeid1", ...},
{"id": "nodeid2", ...},
...],
"links": [{"source": "nodeid1", "target": "nodeid2", ...},
...],
}
Each node and link can have the following attributes.
Graph attributes
- nodes: a list of nodes
- links: a list of links
- name (optional): the name of the task graph
Node attributes
- id: node identifier unique to the graph
- Only one of these attributes to specify the unit of execution:
- class: the full qualifier name of a task class
- method: the full qualifier name of a function
- ppfmethod: the full qualifier name of a pypushflow function (special input/output convention)
- script: the full qualifier name of a python or shell script
- graph: the representation of another graph (e.g. json file name)
- inputs (optional): static input arguments (for example
{"a": 1}) - inputs_complete (optional): set to
Truewhen the static input covers all required input (used for method and script as the required inputs are unknown)
Link attributes
- source: the id of the source node
- target: the id of the target node
- arguments (optional): a dictionary that maps output names to input names. If the input name is
Nonethe output name receives the complete output of the source. - all_arguments (optional): setting this to
Trueis equivalent to arguments being the identity mapping for all input names. Cannot be used in combination with arguments. - conditions (optional): a dictionary that maps output names to expected values
- on_error (optional): a special condition: task raises an exception. Cannot be used in combination with conditions.
- links: when source and/or target is a graph, this list of dictionaries specifies the links between the super-graph and the sub-graph. The dictionary keys are
- source: the id of the source node in the sub-graph (ignored when the source is not a graph)
- target: the id of the target node in the sub-graph (ignored when the source is not a graph)
- node_attributes (optional): overwrite the node attributes of the target when the target is a graph
Task implementation
All tasks can be described by deriving a class from the Task class.
- required input names: an exception is raised when these inputs are not provided in the graph definition (output from previous tasks or static input values)
- optional input names: no default values provided (need to be done in the
processmethod) - output names: can be connected to downstream input names
- required positional inputs: a positive number
For example
from ewokscore import Task
class SumTask(
Task, input_names=["a"], optional_input_names=["b"], output_names=["result"]
):
def run(self):
result = self.inputs.a
if self.inputs.b:
result += self.inputs.b
self.outputs.result = result
When a task is defined as a method or a script, a class wrapper will be generated automatically:
- method: defined by a
Taskclass with one required input argument ("method": full qualifier name of the method) and one output argument ("return_value") - ppfmethod: same as method but it has one optional input "ppfdict" and one output "ppfdict". The output dictonary is the input dictionary updated by the method. The input dictionary is unpacked before passing to the method. The output dictionary is unpacked when checking conditions in links.
- ppfport: ppfmethod which is the identity mapping
- script: defined by a
Taskclass with one required input argument ("method": full qualifier name of the method) and one output argument ("return_value")
Hash links
The task graph object in ewokscore provides additional functionality in top of what networkx provides:
- A Task can have several positional and named input variables and named output variables.
- A Task has a universal hash which is the hash of the inputs with a Task nonce.
- An output Variable has a universal hash which is the hash of the Task with the variable name as nonce.
- An input Variable can be
- static:
- provided by the persistent Graph representation
- universal hash of the data
- dynamic:
- provided by upstream Tasks at runtime
- output Variable of the upstream task so it has a universal hash
- static:
The actual output data of a Task is never hashed. So we assume that if you provide a task with the same input, you will get the same output. Or at the very least it will not be executed again when succeeded once.
Hash linking of tasks serves the following purpose:
- Changing static input upstream in the graph will effectively create new tasks.
- The hashes provide a unique ID to create a URI for persistent storage.
- Variables can be provided with universal hashes to replace the hashing of the actual inputs.
- As data can be passed by passing hashes, serialization for distibuted task scheduling can be done efficiently (not much data to serialize) and no special serializer is required to serialize hashes (as they are just strings).
Data management is currently only a proof-of-concept based on JSON files with the universal hashes as file names.
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