Latest Life-Line version of Fiji for easy inclusion in python projects.
Project description
This software will download the latest Life-Line version of Fiji, make the correct cross-platform binary available and provide a macro submodule which makes automation of Fiji trivial from python.
See the video showing a demo of fijibin.
Current Fiji Life-Line version in this package is 2014 November 25.
If you experience any trouble with this module, please submit an issue or send a pull request on github.
Install
pip install fijibin
Usage
>>> import fijibin
>>> fijibin.BIN
'/Users/arve/.bin/Fiji.app/Contents/MacOS/ImageJ-macosx'
>>> fijibin.VERSION
'0.0.5'
>>> fijibin.FIJI_VERSION
'20141125'fijibin.BIN will point to linux, mac or windows version, depending on the operating system detected via platform.
Macros
import fijibin.macro
macro.run(macro_string_or_list_of_strings)Refetch binary
>>> from fijibin.fetch import fetch
>>> fetch()See more in the API reference.
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