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Genomics Extension for SQLite

Project description

Genomics Extension for SQLite

("GenomicSQLite")

This SQLite3 loadable extension adds features supporting applications in genome bioinformatics:

  • genomic range indexing for overlap queries & joins
  • streaming storage compression (also available standalone)
  • pre-tuned settings for "big data"

Notice: this project is not associated with the SQLite developers.

https://github.com/mlin/GenomicSQLite

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