Genomics Extension for SQLite

Project description

Genomics Extension for SQLite

("GenomicSQLite")

This SQLite3 loadable extension adds features supporting applications in genome bioinformatics:

genomic range indexing for overlap queries & joins
streaming storage compression (also available standalone)
pre-tuned settings for "big data"

Notice: this project is not associated with the SQLite developers.

https://github.com/mlin/GenomicSQLite

Project details

Release history Release notifications | RSS feed

0.9.4

Mar 1, 2023

0.9.3

Dec 28, 2022

0.9.2

Jul 30, 2022

0.9.1

May 31, 2021

0.8.1

Mar 30, 2021

0.8.0

Feb 8, 2021

0.7.0

Jan 6, 2021

This version

0.6.0

Dec 17, 2020

0.5.1

Dec 7, 2020

0.5.0

Nov 30, 2020

0.4.0

Sep 18, 2020

0.3.0

Aug 31, 2020

0.2.0

Aug 14, 2020

0.1.5

Aug 7, 2020

0.1.4 yanked

Aug 7, 2020

Reason this release was yanked:

buggy

0.1.3

Jul 28, 2020

0.1.2

Jul 28, 2020

0.1.1

Jul 28, 2020

0.1.0

Jul 28, 2020

0.0.0.post1.dev53043455 pre-release

Jul 21, 2020

0.0.0 yanked

Jul 21, 2020

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

genomicsqlite-0.6.0.tar.gz (989.4 kB view details)

Uploaded Dec 17, 2020 Source

File details

Details for the file genomicsqlite-0.6.0.tar.gz.

File metadata

Download URL: genomicsqlite-0.6.0.tar.gz
Upload date: Dec 17, 2020
Size: 989.4 kB
Tags: Source
Uploaded using Trusted Publishing? No
Uploaded via: twine/3.2.0 pkginfo/1.5.0.1 requests/2.22.0 setuptools/50.3.2 requests-toolbelt/0.9.1 tqdm/4.46.0 CPython/3.8.5

File hashes

Hashes for genomicsqlite-0.6.0.tar.gz
Algorithm	Hash digest
SHA256	`6f72b62a2330a1f2440ae14589bafa307a5760ba8315458a7ded3d86d47bccff`
MD5	`0fef75062f8ea9ccad15a021573e4c4f`
BLAKE2b-256	`e596e51163aed5cd5296c0d2e33cc9609bf8422f28e75b38b8061de82674fb96`