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Check access to the source files of virtual datasets

Project description

hdf5-vds-check

Check access to the source files of virtual datasets

When you read a virtual dataset, HDF5 will skip over source files it can't open, giving you the virtual dataset's fill value instead. It's not obvious whether you have a permissions problem, a missing file, or a genuinely empty part of the dataset.

This tool checks all virtual datasets in a file to alerts you to any problems opening the source files.

Install

pip install hdf5_vds_check

Usage

hdf5-vds-check file_with_virtual_datasets.h5

If any sources for virtual datasets can't be accessed, it will list details of these, and then exit with status 1.

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1.0

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