Python heatmap interface using intuitive grammar of graphics, implemented as an rpy2 wrapper around ComplexHeatmap package

Project description

rpy2-complex-heatmap-grammar

Python heatmap interface using intuitive grammar of graphics, implemented as an rpy2 wrapper around ComplexHeatmap package.

What this package is:

an exploration in search of the dream API for complex heatmap creation
trying to get the best of Python, ggplot2 (/plotnine) and ComplexHeatmap
oriented towards data exploration in Jupyter notebooks with IPython (-compatible) kernel
pushing boundaries for Python-R interoperability via rpy2

What this package is NOT:

likely not suitable for beginners (if you can get through installation/used rpy2 before you are not a beginner)
not a drop-in substitute for ComplexHeatmap for Python
not ready for production use (API is subject to change)
not affiliated with rpy2 or ComplexHeatmap

Intrigued? Check out the examples.

Requirements

Installation from PyPI:

pip install heatmap-grammar

Latest version:

pip install git+https://github.com/krassowski/rpy2-complex-heatmap-grammar.git

0.0.5

Aug 4, 2022

0.0.4

Aug 4, 2022

This version

0.0.3

Aug 2, 2022

0.0.2

Jul 17, 2022

0.0.1

Jul 15, 2022

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Uploaded Aug 2, 2022 Python 3

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