Whole-slide image streamer for TensorFlow.

Project description

histomics_stream

Overview

The goal of this project is to create a whole-slide image file reader for machine learning with TensorFlow. This reader will allow users to extract pixel data from whole-slide image formats, and will support reading paradigms that are commonly used during training and inference.

Installation for Python

histomics_stream can be easily installed with Python wheels. If you do not want the installation to be to your current Python environment, you should first create and activate a Python virtual environment (venv) to work in. Then, run the following from the command-line:

pip install histomics_stream

Launch python3, import the histomics_stream package, and use it

import histomics_stream as hs

This has been tested with tensorflow:2.6.2-gpu.

History

Through version 1.0.6, this project was known as tensorflow_reader.

Project details

Release history Release notifications | RSS feed

2.5.3

Oct 1, 2024

2.4.0

May 31, 2023

2.3.3

Mar 28, 2023

2.3.2

Mar 22, 2023

2.3.1

Mar 22, 2023

2.3.0

Mar 21, 2023

2.2.4

May 3, 2022

2.2.3

Mar 15, 2022

2.2.2

Mar 10, 2022

2.2.1

Feb 23, 2022

2.2.0

Feb 7, 2022

2.1.8

Feb 4, 2022

2.1.7

Feb 2, 2022

2.1.6

Feb 2, 2022

2.1.5

Feb 1, 2022

2.1.4

Feb 1, 2022

2.1.3

Jan 24, 2022

2.1.2

Jan 20, 2022

This version

2.1.1

Jan 3, 2022

2.1.0

Dec 21, 2021

2.0.0

Nov 19, 2021

1.1.1

Nov 19, 2021

1.1.0

May 25, 2021

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