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histoprint

Project description

Pretty print Numpy (and other) histograms to the console

How does it work?

Histoprint uses a mix of terminal color codes and unicode trickery (i.e. combining characters) to plot overlaying histograms.

Examples

Some examples:

import numpy as np
from histoprint import text_hist, print_hist

A = np.random.randn(1000) - 2
B = np.random.randn(1000)
C = np.random.randn(1000) + 2
D = np.random.randn(500) * 2

# text_hist is a thin wrapper for numpy.histogram
text_hist(
    B, bins=[-5, -3, -2, -1, -0.5, 0, 0.5, 1, 2, 3, 5], title="Variable bin widths"
)

histA = np.histogram(A, bins=15, range=(-5, 5))
histB = np.histogram(B, bins=15, range=(-5, 5))
histC = np.histogram(C, bins=15, range=(-5, 5))
histD = np.histogram(D, bins=15, range=(-5, 5))
histAll = ([histA[0], histB[0], histC[0], histD[0]], histA[1])

# print_hist can be used to print multiple histograms at once
# (or just to print a single one as returned by numpy.histogram)
print_hist(histAll, title="Overlays", labels="ABCDE")
print_hist(
    histAll,
    title="Stacks",
    stack=True,
    symbols="      ",
    bg_colors="rgbcmy",
    labels="ABCDE",
)
print_hist(
    histAll,
    title="Summaries",
    symbols=r"=|\/",
    fg_colors="0",
    bg_colors="0",
    labels=["AAAAAAAAAAAAAAAA", "B", "CCCCCCCCCCCCC", "D"],
    summary=True,
)
examples.png

The last example does not use terminal colors, so it can be copied as text:

                                   Summaries
-5.00e+00 _
-4.33e+00 _═⃫
-3.67e+00 _═⃫═⃫═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏
-3.00e+00 _═⃫═⃫═⃫═⃫═⃫═⃫═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏
-2.33e+00 _╪⃫╪⃫═⃫═⃫═⃫═⃫═⃫═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏
-1.67e+00 _╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫═⃫═⃫═⃫═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏
-1.00e+00 _╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏
-3.33e-01 _╪⃥⃫╪⃥⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪⃫╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏
 3.33e-01 _╪⃥⃫╪⃥⃫╪⃥⃫╪⃥⃫╪⃥⃫╪⃥⃫╪⃫╪⃫╪⃫╪⃫│⃫│⃫│⃫│⃫│⃫│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏
 1.00e+00 _╪⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏
 1.67e+00 _│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥│⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥
 2.33e+00 _│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥⃫│⃥│⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥
 3.00e+00 _│⃥⃫│⃥⃫ ⃥⃫ ⃥⃫ ⃥⃫ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥
 3.67e+00 _ ⃥⃫ ⃥⃫ ⃥⃫ ⃥⃫ ⃥⃫ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥
 4.33e+00 _ ⃥⃫ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥ ⃥
 5.00e+00 _ ⃥⃫ ⃥
             ═͏ AAAAAAAAAAAAAAAA │͏ B          ⃥ CCCCCCCCCCCCC  ⃫ D
       Sum:  9.99e+02           1.00e+03    9.99e+02        4.92e+02
       Avg: -1.98e+00           1.13e-02    1.99e+00       -1.71e-01
       Std:  1.03e+00           1.03e+00    9.94e-01        2.00e+00

Command line interface

Histoprint also comes with a simple command line interface to create histograms of tabulated data. It can read in text files or directly from STDIN:

$ histoprint --help
Usage: histoprint [OPTIONS] INFILE

  Read INFILE and print a histogram of the contained columns.

  INFILE can be '-', in which case the data is read from STDIN.

Options:
  -b, --bins TEXT                 Number of bins or space-separated bin edges.
  -t, --title TEXT                Title of the histogram.
  --stack / --nostack             Stack the histograms.
  -s, --summary / -S, --nosummary
                                  Print summary statistics.
  -l, --label TEXT                Labels for the data, one for each column.
  --symbols TEXT                  Symbol cycle for multiple histograms.
                                  Choices & default: ' |=/\'

  --fg-colors TEXT                Colour cycle for foreground colours.
                                  Default: 'WWWWW', Choices:
                                  '0rgbcmykwRGBCMYKW'

  --bg-colors TEXT                Colour cycle for background colours.
                                  Default: 'K0000', Choices:
                                  '0rgbcmykwRGBCMYKW'

  --version                       Show the version and exit.
  --help                          Show this message and exit.


$ histoprint -t "Title" -s -b "0.5 1.5 2.5 3.5 4.5" -l A -l B --fg-colors "0" --bg-colors "0" --symbols "|=" - <<EOF
1 2
2 3
2 3
2 nan
3 4
3 4
EOF
                                     Title
 5.00e-01 _
           │͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏
           │͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏
           │͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏
 1.50e+00 _│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏
           ╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏
           ╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏
           ╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏
 2.50e+00 _╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏│͏
           ╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏
           ╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏
           ╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏
 3.50e+00 _╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏╪͏
           ═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏
           ═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏
           ═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏
 4.50e+00 _═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏═͏
                               │͏ A         ═͏ B
                         Tot:  6.00e+00    5.00e+00
                         Avg:  2.17e+00    3.20e+00
                         Std:  6.87e-01    7.48e-01

Support for other histogram types

Histoprint can directly plot other (more fancy) types of histograms if they offer a way of being converted to the Numpy format. Currently this means they have to expose a numpy() or to_numpy() method. Both the TH1 histograms of uproot, as well as the histograms of boost-histogram are supported like this:

import boost_histogram as bh
hist = bh.Histogram(bh.axis.Regular(20, -3, 3))
hist.fill(np.random.randn(1000))
print_hist(hist, title="Boost Histogram")

import uproot
file = uproot.open("http://scikit-hep.org/uproot/examples/Event.root")
hist = file["htime"]
print_hist(hist, title="uproot TH1")

How to get it?

$ pip install [--user] histoprint

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