Skip to main content

IBL libraries

Project description

IBL Python Libraries

Build Status on master Build Status on dev

Description

Library used to implement the International Brain Laboratory data pipeline. Currently in active development. The library as currently 4 main modules:

  • brainbox: neuroscience analysis oriented library
  • ibllib: general purpose library containng I/O, signal processing and IBL data pipelines utilities.
  • oneibl: interface to the Alyx database of experiments to access IBL data.
  • alf: implementation of ALF file naming convention Release Notes here

Requirements

OS: Deployed on Linux and Windows. Minimally tested for Mac.

Python Module: Python 3.6 or higher, we develop on 3.7.

Documentation

https://ibllib.readthedocs.io/en/latest/

Installation

https://ibllib.readthedocs.io/en/latest/02_installation_python.html#

Demonstration

https://ibllib.readthedocs.io/en/latest/_static/one_demo.html

Contribution and development practices

See developper's installation guide here: https://ibllib.readthedocs.io/en/latest/02_installation_dev_python.html

We use gitflow and Semantic Versioning.

Before commiting to your branch:

  • run tests
  • flake8 This is also enforced by continuous integration.

Matlab Library

The Matlab library has moved to its own repository here: https://github.com/int-brain-lab/ibllib-matlab/

Project details


Release history Release notifications | RSS feed

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

ibllib-1.3.6.tar.gz (126.0 kB view details)

Uploaded Source

Built Distribution

ibllib-1.3.6-py3-none-any.whl (171.8 kB view details)

Uploaded Python 3

File details

Details for the file ibllib-1.3.6.tar.gz.

File metadata

  • Download URL: ibllib-1.3.6.tar.gz
  • Upload date:
  • Size: 126.0 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.13.0 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.0.1 requests-toolbelt/0.9.1 tqdm/4.32.1 CPython/3.6.7

File hashes

Hashes for ibllib-1.3.6.tar.gz
Algorithm Hash digest
SHA256 a7513e46939d0cb5bfa06e0adf0fcd40d47a1124bd983b493172c0f975b7b2ce
MD5 a396ed64f50757318da69009f5c695d4
BLAKE2b-256 c3959d5f4ea83394841711f688077e476d86dec056d9711639922a56b246c434

See more details on using hashes here.

File details

Details for the file ibllib-1.3.6-py3-none-any.whl.

File metadata

  • Download URL: ibllib-1.3.6-py3-none-any.whl
  • Upload date:
  • Size: 171.8 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.13.0 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.0.1 requests-toolbelt/0.9.1 tqdm/4.32.1 CPython/3.6.7

File hashes

Hashes for ibllib-1.3.6-py3-none-any.whl
Algorithm Hash digest
SHA256 c35747c34c6f98f2e3cd15584f48854a8fc5c287d3cbb76172f09ff72a483ff3
MD5 75942c7570c4fe8c5c4b653bb95bda31
BLAKE2b-256 2a5a3bb61cf4a7941c3d827a68065df3368214366c3227efb0252d35eb584622

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page