Skip to main content

Submission scoring for the ISIC Challenge

Project description

ISIC: Skin Lesion Analysis Towards Melanoma Detection Scoring

PyPI Docker Build Status

Automated scoring code for the ISIC Challenge.

Installation

Python

Python version >= 3.8 is required.

pip install isic-challenge-scoring

Docker

docker pull isic/isic-challenge-scoring:latest

Usage

Python

Segmentation (Task 1)

isic-challenge-scoring segmentation /path/to/ISIC_GroundTruth/ /path/to/ISIC_predictions/

Classification (Task 3)

isic-challenge-scoring classification /path/to/ISIC_GroundTruth.csv /path/to/ISIC_prediction.csv

Docker

Since the application requires read access to files, Docker must mount them within the container; these examples use --mount to prevent nonexistent host paths from being accidentally created.

Segmentation (Task 1)

docker run \
  --rm \
  --mount type=bind,source="/path/to/ISIC_GroundTruth/",destination=/root/gt/,readonly \
  --mount type=bind,source="/path/to/ISIC_predictions/",destination=/root/pred/,readonly \
  isic/isic-challenge-scoring:latest \
  segmentation \
  /root/gt/ \
  /root/pred/

Classification (Task 3)

docker run \
  --rm \
  --mount type=bind,source="/path/to/ISIC_GroundTruth.csv",destination=/root/gt.csv,readonly \
  --mount type=bind,source="/path/to/ISIC_prediction.csv",destination=/root/pred.csv,readonly \
  isic/isic-challenge-scoring:latest \
  classification \
  /root/gt.csv \
  /root/pred.csv

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

isic-challenge-scoring-5.6.0.tar.gz (17.9 kB view details)

Uploaded Source

Built Distribution

isic_challenge_scoring-5.6.0-py3-none-any.whl (20.6 kB view details)

Uploaded Python 3

File details

Details for the file isic-challenge-scoring-5.6.0.tar.gz.

File metadata

  • Download URL: isic-challenge-scoring-5.6.0.tar.gz
  • Upload date:
  • Size: 17.9 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.8.0 pkginfo/1.8.2 readme-renderer/34.0 requests/2.27.1 requests-toolbelt/0.9.1 urllib3/1.26.9 tqdm/4.63.0 importlib-metadata/4.11.3 keyring/23.5.0 rfc3986/2.0.0 colorama/0.4.4 CPython/3.10.2

File hashes

Hashes for isic-challenge-scoring-5.6.0.tar.gz
Algorithm Hash digest
SHA256 839cfee28a98d3baa8ed0e35e66a6190b4675f1fce29301d2d107c03d59a454f
MD5 d88126b356d278ef6f20d53b1d72a6b7
BLAKE2b-256 e0efe0ba95e281497766a75cdceb4976d26d731d4cf02c33fcc07b38a743be88

See more details on using hashes here.

Provenance

File details

Details for the file isic_challenge_scoring-5.6.0-py3-none-any.whl.

File metadata

  • Download URL: isic_challenge_scoring-5.6.0-py3-none-any.whl
  • Upload date:
  • Size: 20.6 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.8.0 pkginfo/1.8.2 readme-renderer/34.0 requests/2.27.1 requests-toolbelt/0.9.1 urllib3/1.26.9 tqdm/4.63.0 importlib-metadata/4.11.3 keyring/23.5.0 rfc3986/2.0.0 colorama/0.4.4 CPython/3.10.2

File hashes

Hashes for isic_challenge_scoring-5.6.0-py3-none-any.whl
Algorithm Hash digest
SHA256 9fd7296892b831a2bf2692041d9936ac23dab96bd80458275d0ddaade07dae89
MD5 ee76d0a3516aa2377bd8730adedb61c8
BLAKE2b-256 1c4aa1e1f546b89f87be18c8f24658864d20b2cc043e34ddfc7facbd62161e0a

See more details on using hashes here.

Provenance

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page