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Jubatus Toolkit

Project description

Travis Coveralls PyPi

jubakit: Jubatus Toolkit

jubakit is a Python module to access Jubatus features easily. jubakit can be used in conjunction with scikit-learn so that you can use powerful features like cross validation and model evaluation.

Currently jubakit supports Classifier, Anomaly and Weight engines.

Install

pip install jubakit

Requirements

  • Python 2.6, 2.7, 3.3, 3.4 or 3.5.

  • Jubatus needs to be installed.

  • Although not mandatory, installing scikit-learn is required to use some features like K-fold cross validation.

Quick Start

The following example shows how to perform train/classify using CSV dataset.

from jubakit.classifier import Classifier, Schema, Dataset, Config
from jubakit.loader.csv import CSVLoader

# Load a CSV file.
loader = CSVLoader('iris.csv')

# Define types for each column in the CSV file.
schema = Schema({
  'Species': Schema.LABEL,
}, Schema.NUMBER)

# Get the shuffled dataset.
dataset = Dataset(loader, schema).shuffle()

# Run the classifier service (`jubaclassifier` process).
classifier = Classifier.run(Config())

# Train the classifier.
for _ in classifier.train(dataset): pass

# Classify using the trained classifier.
for (idx, label, result) in classifier.classify(dataset):
  print("true label: {0}, estimated label: {1}".format(label, result[0][0]))

Examples by Topics

See the example directory for working examples.

Example

Topics

Requires scikit-learn

classifier_csv.py

Handling CSV file and numeric features

classifier_shogun.py

Handling CSV file and string features

classifier_digits.py

Handling toy dataset (digits)

classifier_libsvm.py

Handling LIBSVM file

classifier_kfold.py

K-fold cross validation and metrics

classifier_parameter.py

Finding best hyper parameter

classifier_bulk.py

Bulk Train-Test Classifier

classifier_twitter.py

Handling Twitter Streams

anomaly_auc.py

Anomaly detection and metrics

weight_shogun.py

Tracing fv_converter behavior using Weight

Concepts

  • Loader fetches data from various data sources (e.g., CSV file, RDBMS, MQ, Twitter stream, etc.) in key-value format.

  • Schema defines the data type (string feature, numeric feature, ground truth (label), etc.) for each keys of data loaded by Loader.

  • Dataset is an abstract representation of a sequence of data that binds Loader and Schema.

  • Service receives Dataset and make update/analyze RPC call to Jubatus servers.

License

MIT License

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