k2flix 1.1.0

K2flix: Kepler pixel data visualizer
====================================

***Create beautiful quicklook movies from the pixel data observed by
NASA's Kepler spacecraft.***

|PyPI| |PyPI| |Travis status| |MIT license| |DOI| |ADS Bibcode|

K2flix makes it easy to inspect the CCD pixel data obtained by `NASA's
Kepler space telescope <http://kepler.nasa.gov>`__. The need for this
tool arises from the fact that the two-wheeled extended Kepler mission,
K2, is affected by new sources of noise -- including pointing jitter and
foreground asteroids -- which are more easy to spot by eye than by
algorithm. The code takes Kepler's *Target Pixel Files (TPF)* as input
and turns them into contrast-stretched animated gifs or MPEG-4 movies.
These *TPF files* are publically available from the `Kepler
archive <https://archive.stsci.edu/missions/kepler/target_pixel_files/>`__
and the `K2
archive <https://archive.stsci.edu/missions/k2/target_pixel_files/>`__.
K2flix can be used both as a command-line tool or using its Python API.

Example
~~~~~~~

Asteroids commonly pass in front of Kepler/K2 targets. How many can you
spot in this example 2-day animation?

::

$ k2flix --start 545 --stop 680 --step 1 --fps 12 http://archive.stsci.edu\
/missions/k2/target_pixel_files/c1/201500000/72000/ktwo201572338-c01_lpd-targ.fits.gz

To see many more examples, follow
[@KeplerBot](https://twitter.com/KeplerBot) on Twitter!

Installation
~~~~~~~~~~~~

If you have a working installation of Python on your system, you can
install k2flix using pip:

::

$ pip install k2flix

Alternatively, you can get the latest version by installing from source:

::

$ git clone https://github.com/barentsen/k2flix.git
$ cd k2flix
$ python setup.py install

K2flix has only been tested under Linux at present. Get in touch if you
encounter issues on OS X or Windows.

Using k2flix
~~~~~~~~~~~~

Converting a Kepler pixel file to an animated gif:

::

$ k2flix tpf-file.fits.gz

Converting a Kepler pixel file to an MPEG-4 movie:

::

$ k2flix -o movie.mp4 tpf-file.fits.gz

K2flix supports reading from web URLs, so you can generate a movie
directly from the data archive:

::

$ k2flix https://archive.stsci.edu/missions/k2/target_pixel_files/c1/201400000/00000/ktwo201400022-c01_lpd-targ.fits.gz

To see all the options, use the ``--help`` argument to see the full
usage information:

::

$ k2flix --help
usage: k2flix [-h] [-o filename] [--start IDX] [--stop IDX] [--step STEP]
[--fps FPS] [--dpi DPI] [--min_percent MIN_PERCENT]
[--max_percent MAX_PERCENT] [--cmap colormap_name] [--raw]
[--flags] [--jd | --mjd | --bjd | --bkjd | --cadence]
filename [filename ...]

Converts a Target Pixel File (TPF) from NASA's Kepler/K2 spacecraft into a
movie or animated gif.

positional arguments:
filename path to one or more Kepler Target Pixel Files (TPF)

optional arguments:
-h, --help show this help message and exit
-o filename, --output filename
output filename (default: gif with the same name as
the input file)
--start IDX first frame to show (default: 0)
--stop IDX last frame to show (default: -1)
--step STEP spacing between frames (default: output 100 frames)
--fps FPS frames per second (default: 15)
--dpi DPI resolution of the output in dots per K2 pixel
--min_percent MIN_PERCENT
percentile value used to determine the minimum cut
level (default: 1.0)
--max_percent MAX_PERCENT
percentile value used to determine the maximum cut
level (default: 95.0)
--cmap colormap_name matplotlib color map name (default: gray)
--raw show the uncalibrated pixel data ('RAW_CNTS')
--flags show quality flags
--jd show the Julian Day
--mjd show the Modified Julian Day
--bjd show the Barycentric Julian Day
--bkjd show the Bareycentric Kepler Julian Day
--cadence show the cadence number

Citing
~~~~~~

If you use this tool in an academic publication, please include a
citation. The code has been registered in the Astrophysics Source Code
Library `[ascl:1503.001] <http://ascl.net/code/v/1069>`__ and the
preferred BibTeX entry is:

::

@MISC{2015ascl.soft03001B,
author = {{Barentsen}, G.},
title = "{K2flix: Kepler pixel data visualizer}",
howpublished = {Astrophysics Source Code Library},
year = 2015,
month = mar,
archivePrefix = "ascl",
eprint = {1503.001},
adsurl = {http://adsabs.harvard.edu/abs/2015ascl.soft03001B},
adsnote = {Provided by the SAO/NASA Astrophysics Data System},
doi = {10.5281/zenodo.15576},
url = {http://dx.doi.org/10.5281/zenodo.15576}
}

Contributing
~~~~~~~~~~~~

To report bugs and request features, please use the `issue
tracker <https://github.com/barentsen/k2flix/issues>`__. Code
contributions are very welcome.

License
~~~~~~~

Copyright 2016 Geert Barentsen. K2flix is free software made available
under the MIT License. For details see the LICENSE file.

.. |PyPI| image:: http://img.shields.io/pypi/v/k2flix.svg
:target: https://pypi-hypernode.com/pypi/k2flix/
.. |PyPI| image:: http://img.shields.io/pypi/dm/k2flix.svg
:target: https://pypi-hypernode.com/pypi/k2flix/
.. |Travis status| image:: http://img.shields.io/travis/barentsen/k2flix/master.svg
:target: http://travis-ci.org/barentsen/k2flix
.. |MIT license| image:: http://img.shields.io/badge/license-MIT-blue.svg
:target: https://github.com/barentsen/k2flix/blob/master/LICENSE
.. |DOI| image:: https://zenodo.org/badge/doi/10.5281/zenodo.15576.svg
:target: http://dx.doi.org/10.5281/zenodo.15576
.. |ADS Bibcode| image:: https://img.shields.io/badge/NASA%20ADS-2015ascl.soft03001B-blue.svg
:target: http://adsabs.harvard.edu/abs/2015ascl.soft03001B