convenience library for talking with leica matrix screener scanning templates
Project description
Overview
Convenience library for talking with Leica matrix screener scanning template XMLs.
Installation
Install using pip…
pip install leicascanningtemplateExample
from leicaleicascanningtemplate import ScanningTemplate
tmpl = ScanningTemplate('path/to/scantempl.xml')
tmpl.add_well(well_x=2, well_y=3, start_x=30e-3, start_y=44e-3)
tmpl.write()
# x stage position of field
print(tmpl.field(well_x=1, well_y=1, field_x=1, field_y=1).FieldXCoordinate)Read more on available elements and attributes in SCANNINGTEMPLATE.md.
Documentation
Read about available commands in the API reference: http://leicascanningtemplate.rtfd.org/
Development
Install dependencies and link development version of leicascanningtemplate to pip:
pip install -r dev-requirements.txt
./setup.py developTesting
pip install tox
toxBuild documentation locally
To build the documentation:
make docsRelease history Release notifications | RSS feed
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