A Python library for working with NeuroML descriptions of neuronal models
Project description
## Introduction
This package provides Python libNeuroML, for working with neuronal models specified in NeuroML 2 (http://neuroml.org/neuromlv2).
For more about libNeuroML see:
Michael Vella, Robert C. Cannon, Sharon Crook, Andrew P. Davison, Gautham Ganapathy, Hugh P. C. Robinson, R. Angus Silver and Padraig Gleeson, libNeuroML and PyLEMS: using Python to combine procedural and declarative modeling approaches in computational neuroscience [Frontiers in Neuroinformatics 2014](http://journal.frontiersin.org/Journal/10.3389/fninf.2014.00038/abstract), doi: 10.3389/fninf.2014.00038
_**PLEASE CITE THE PAPER ABOVE IF YOU USE libNeuroML!**_
Documentation is available at http://readthedocs.org/docs/libneuroml/en/latest/
For installation instructions, see http://readthedocs.org/docs/libneuroml/en/latest/install.html
## Process
Most of the work happens in the [development branch](https://github.com/NeuralEnsemble/libNeuroML/tree/development). That branch is kept up to date with the development branches for [NeuroML 2](https://github.com/NeuroML/NeuroML2/tree/development) and related libraries. See https://neuroml.org/getneuroml for an overview of the various NeuroML libraries.
Note that [pyNeuroML](https://github.com/NeuroML/pyNeuroML) is also in active development with other NeuroML2 utilities besides parsing/modifying/writing which this package concentrates on.
## Travis integration
libNeuroML is integrated with the the [Travis Continuous Integration service](http://travis-ci.org/).
[](https://travis-ci.org/NeuralEnsemble/libNeuroML)
## Changelog
- ### version 0.2.18
Updated to use the final stable Schema for NeuroML v2beta4
Tested with Python 3
- ### version 0.2.4
Updated to use the Schema for NeuroML v2beta4
- ### version 0.2.2
Updated to use the Schema for NeuroML v2beta3
Ensures numpy & pytables are only required when using non-XML loaders/writers
- ### version 0.2.0
Updated to use the Schema for NeuroML v2beta2
- ### version 0.1.9
Minor release: Update to latest schema
### version 0.1.8
Several Bug fixes and small enhamcements
Support for latest NeuroML schema (see change outline)
JSON serialization
MongoDB backend
HDF5 serialization
Improved installation process
All usage examples are now run on the Travis-CI continuous integration server to confirm that that they do not error.
Schema validation utility
Improved documentation and documentation new look
- copyright:
Copyright 2017 by the libNeuroML team, see AUTHORS.
- license:
Modified BSD License, see LICENSE for details.
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