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miniwdl download plugin for s3:// using s3parcp

Project description

miniwdl-s3parcp

This Python package is a MiniWDL plugin to handle S3 download (localization) and upload (delocalization) tasks for S3 URIs in WDL workflow I/O.

Installation

pip install miniwdl-s3parcp

To check that the installation was successful, run miniwdl --version, which will list available plugins, including this one.

Usage

The plugin will automatically be used to handle s3://bucket/key URIs found in workflow inputs.

Project details


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