miniwdl plugin for progressive upload of task output files to Amazon S3

Project description

miniwdl-s3upload

This Python package is a MiniWDL plugin to handle the orchestration of S3 upload (delocalization) for S3 URIs in WDL workflow I/O.

pip3 install miniwdl-s3upload

To check that the installation was successful, run miniwdl --version, which will list available plugins, including this one.

Set the environment variable MINIWDL__S3_PROGRESSIVE_UPLOAD__URI_PREFIX to an S3 URL where the task outputs should be uploaded.

This version

0.0.8

Apr 10, 2021

0.0.7

Apr 8, 2021

0.0.4

Jun 5, 2020

0.0.3

Apr 10, 2020

0.0.2

Apr 10, 2020

0.0.1

Apr 10, 2020

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Uploaded via: twine/3.4.1 importlib_metadata/3.7.3 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.59.0 CPython/3.8.8