miniwdl plugin for progressive upload of task output files to Amazon S3
Project description
miniwdl-s3upload
This Python package is a MiniWDL plugin to handle the orchestration of S3 upload (delocalization) for S3 URIs in WDL workflow I/O.
Installation
pip3 install miniwdl-s3upload
To check that the installation was successful, run miniwdl --version, which will list available plugins, including this one.
Usage
Set the environment variable MINIWDL__S3_PROGRESSIVE_UPLOAD__URI_PREFIX to an S3 URL where the task outputs should be uploaded.
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Source Distribution
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