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A plugin for quantifying shape and neighborhoods from images.

Project description

morphometrics

License PyPI Python Version tests codecov napari hub

A plugin for quantifying shape and neighborhoods from images.


This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Installation

You can install morphometrics via pip:

pip install morphometrics

To install latest development version :

pip install git+https://github.com/kevinyamauchi/morphometrics.git

Example applications

measure the distance between surfaces

napari plugin for measuring properties of segmented objects (regionprops)

object classification

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "morphometrics" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

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