An experimental plugin for viewing Deep Zoom Images (DZI) with napari and zarr.
Project description
napari-dzi-zarr
An experimental plugin for viewing Deep Zoom Images (DZI) with napari + zarr + dask.
This napari plugin was generated with Cookiecutter using with @napari's cookiecutter-napari-plugin template.
Description
The DZI File Format
is a pyramidal tile source specification where individual tiles are RGB/RGBA JPEG/PNG images.
DZI is a very popular tile source for zoomable web-viewers like
OpenSeadragon, and as a result many tile sources are available over
HTTP. This plugin wraps a DZI tile source (local or remote) as a multiscale Zarr, where each pyramidal level is a zarr.Array of shape (level_height, level_width, 3/4), allowing the same images to be viewed
in napari + dask.
Installation
You can install napari-dzi-zarr via pip:
pip install napari-dzi-zarr
Usage
This high-resolution scan of Rembrandt's Night Watch is available thanks to R.G Erdmann. More examples can be found on boschproject.org.
$ napari http://hyper-resolution.org/dzi/Rijksmuseum/SK-C-5/SK-C-5_VIS_20-um_2019-12-21.dzi
Contributing
Contributions are very welcome. Tests can be run with tox.
License
Distributed under the terms of the BSD-3 license, "napari-dzi-zarr" is free and open source software
Issues
If you encounter any problems, please file an issue along with a detailed description.
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
File details
Details for the file napari-dzi-zarr-0.1.2.tar.gz.
File metadata
- Download URL: napari-dzi-zarr-0.1.2.tar.gz
- Upload date:
- Size: 729.6 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.4.1 importlib_metadata/3.10.0 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.60.0 CPython/3.9.2
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | bade1e4777ae51ce03f41b828a83c7859fe96b60692ea9e72ccd9b83a45fcf25 |
|
| MD5 | c518e1cee6f604880aa3837040a4b19e |
|
| BLAKE2b-256 | 44a3587be1a0826e106ee3b43de75ad226c5005cfb3f98d6980ca6cc66a2b75a |
File details
Details for the file napari_dzi_zarr-0.1.2-py3-none-any.whl.
File metadata
- Download URL: napari_dzi_zarr-0.1.2-py3-none-any.whl
- Upload date:
- Size: 7.6 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.4.1 importlib_metadata/3.10.0 pkginfo/1.7.0 requests/2.25.1 requests-toolbelt/0.9.1 tqdm/4.60.0 CPython/3.9.2
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | cb6b37b506c4bfa8ef1f395a84c31a2516c46b5ee98bf2f5180a4fdeb55f0ad3 |
|
| MD5 | 0d5076548e107e6052f204b5edf5a3a2 |
|
| BLAKE2b-256 | 40a2b78f8ab13f9e2fabf314387841c4694517cd2d2b6685b29568759d8b4233 |
