Reusable neuroimaging pipelines with Nipype.
Project description
# pypes
[](http://neuro-pypes.readthedocs.io) [](https://zenodo.org/badge/latestdoi/46623736)
Reusable neuroimaging pipelines using [nipype](http://nipype.readthedocs.io/) and state-of-the-art neuroimaging preprocessing software.
The objectives of this projects are:
easy-to-use, complete, reusable, and configurable pre-processing pipelines, and
high-quality results with the minimum manual intervention in the images.
## Documentation
Please have a look at the documentation [here](http://neuro-pypes.readthedocs.io).
## License
Licensed under the Apache License, Version 2.0.
Changelog
Version 0.3 - 0.3.1
Add motion statistics measures in DTI pipeline.
Improve documentation.
Add SPM+DiReCT option to anatomical preprocessing.
Add invoke examples in tasks.py.
Style and bug fixes.
Fix imports for latest nipype version.
Add plot_ortho_slices function to nilearn interface.
Version 0.2.0 - 0.2.1
Add mkdocs documentation and readthedocs setup.
Add registration options for PET and fMRI. Add options for this in config.
Add group template for fMRI and PET pipelines.
Add brain_mask output to anatomical MR pipeline.
Rename/re-structure fMRI pipeline and files.
Improve PET output file namings.
Add settings for Camino in config.
Fix bug in _get_n_slices in slicetime_params.
Bug fixes.
](https://zenodo.org/badge/latestdoi/46623736){kind=link}