Convert data to nwb

Project description

NWB conversion tools

NWB Conversion Tools is a package for creating NWB files by converting and combining neural data in proprietary formats and adding essential metadata.

Under heavy construction. API is changing rapidly.

Features:

Command line interface
Python API
Leverages SpikeExtractor to support conversion from a number or proprietary formats.

Installation

To install nwb-conversion-tools directly in an existing environment:

$ pip install nwb-conversion-tools

Alternatively, to clone the repository and set up a conda environment, do:

$ git clone https://github.com/catalystneuro/nwb-conversion-tools
$ cd nwb-conversion-tools
$ conda env create -f make_env.yml
$ conda activate nwb_conversion_env
$ pip install .

Used by

Project details

Release history Release notifications | RSS feed

0.11.38

Jul 14, 2022

0.11.1

Mar 3, 2022

0.9.9

Feb 4, 2022

0.9.4

Nov 18, 2021

0.9.3

Oct 8, 2021

0.9.2

Sep 28, 2021

0.9.1

Aug 26, 2021

0.8.1

Jun 24, 2021

0.7.2

Mar 24, 2021

0.7.0

Mar 18, 2021

This version

0.6.3

Dec 16, 2020

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

nwb-conversion-tools-0.6.3.tar.gz (14.3 kB view details)

Uploaded Dec 16, 2020 Source

Built Distribution

nwb_conversion_tools-0.6.3-py3-none-any.whl (24.0 kB view details)

Uploaded Dec 16, 2020 Python 3

File details

Details for the file nwb-conversion-tools-0.6.3.tar.gz.

File metadata

Download URL: nwb-conversion-tools-0.6.3.tar.gz
Upload date: Dec 16, 2020
Size: 14.3 kB
Tags: Source
Uploaded using Trusted Publishing? No
Uploaded via: twine/3.2.0 pkginfo/1.6.1 requests/2.24.0 setuptools/49.6.0.post20200814 requests-toolbelt/0.9.1 tqdm/4.48.2 CPython/3.7.7

File hashes

Hashes for nwb-conversion-tools-0.6.3.tar.gz
Algorithm	Hash digest
SHA256	`95eca443b74f7dd25c978cbbd4f75159df826eea1703b094e350327e6b4e1a3b`
MD5	`f553a41dd4a71c4944aaffb6513edd70`
BLAKE2b-256	`64c1c5f5ae1125bc253967b2ca6b90a2b5fc86819071b2a63cc6d6b446b7374e`

See more details on using hashes here.

File details

Details for the file nwb_conversion_tools-0.6.3-py3-none-any.whl.

File metadata

Download URL: nwb_conversion_tools-0.6.3-py3-none-any.whl
Upload date: Dec 16, 2020
Size: 24.0 kB
Tags: Python 3
Uploaded using Trusted Publishing? No
Uploaded via: twine/3.2.0 pkginfo/1.6.1 requests/2.24.0 setuptools/49.6.0.post20200814 requests-toolbelt/0.9.1 tqdm/4.48.2 CPython/3.7.7

File hashes

Hashes for nwb_conversion_tools-0.6.3-py3-none-any.whl
Algorithm	Hash digest
SHA256	`41d676ba268921e150213dcfeac4392c584a31626e63c3effa5b017659cbbb78`
MD5	`ebebbe4a77933f49a4e7178c8c604120`
BLAKE2b-256	`2c6521980b1adf6ef100db8ea0cbb4ce2a68d17d4de55ed13c741496321bc751`