ols-client

A Python client for the EBI Ontology Lookup Service RESTful API

These details have not been verified by PyPI

Project links

Homepage

Development Status
- 4 - Beta
Environment
- Console
Intended Audience
- Developers
- Science/Research
License
- OSI Approved :: MIT License
Operating System
- OS Independent
Programming Language
Topic
- Scientific/Engineering :: Bio-Informatics

Project description

A Python wrapper for accessing the RESTful API of the Ontology Lookup Service

Installation

Install the latest stable version from PyPI

$ python3 -m pip install ols_client

Install the latest version directly from GitHub

$ python3 -m pip install git+https://github.com/cthoyt/ols-client.git

Cookbook

Getting labels from ontology

>>> from ols_client import get_labels
>>> labels = get_labels('chebi')

Getting labels from ontology using an alternative OLS

>>> from ols_client import get_labels
>>> labels = get_labels('chebi', ols_base='http://lookup.scaiview.com/ols-boot/api/')

Using the CLI

$ python3 -m ols_client labels chebi > chebi.txt

Project details

These details have not been verified by PyPI

Project links

Homepage

Development Status
- 4 - Beta
Environment
- Console
Intended Audience
- Developers
- Science/Research
License
- OSI Approved :: MIT License
Operating System
- OS Independent
Programming Language
Topic
- Scientific/Engineering :: Bio-Informatics

Release history Release notifications | RSS feed

0.1.4

May 6, 2023

0.1.3

Feb 21, 2023

0.1.2

Sep 16, 2022

0.1.1

Sep 9, 2022

0.1.0

Sep 7, 2022

This version

0.0.9

Nov 2, 2017

0.0.8

Oct 7, 2017

0.0.7

Sep 30, 2017

0.0.6

Sep 30, 2017

0.0.4

Aug 8, 2017

0.0.2

Jul 28, 2017

0.0.1

Jul 12, 2017

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