MAPR is a Python plugin for OMERO.web
Project description
MAPR
An OMERO.web app allowing to browse the data through attributes linked to the image
Requirements
OMERO 5.3 or newer.
Installing from Pypi
This section assumes that an OMERO.web is already installed.
Install the app using pip:
$ pip install omero-mapr
plug in the app to OMERO.web
$ bin/omero config append omero.web.apps '"omero_mapr"'
$ bin/omero config set omero.web.ui.top_links '[["IDR", {"viewname": "webindex", "query_string": {"experimenter": -1}}, {"title": "Image Data Repository"}], ["Genes", {"viewname": "maprindex_gene", "query_string": {"experimenter": -1}}, {"title": "Genes browser"}], ["Phenotypes", {"viewname": "maprindex_phenotype", "query_string": {"experimenter": -1}}, {"title": "Phenotypes browser"}], ["siRNA", {"viewname": "maprindex_sirna", "query_string": {"experimenter": -1}}, {"title": "siRNA browser"}], ["Compound", {"viewname": "maprindex_compound", "query_string": {"experimenter": -1}}, {"title": "Compound browser"}], ["Organism", {"viewname": "maprindex_organism", "query_string": {"experimenter": -1}}, {"title": "Organism browser"}]]'
Now restart OMERO.web as normal.
License
MAPR is released under the AGPL.
Copyright
2016, The Open Microscopy Environment
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omero-mapr-0.1.7.tar.gz
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