No project description provided
Project description
PhEval - Phenotypic Inference Evaluation Framework
There is currently no empirical framework to evaluate the performance of phenotype matching and prioritization tools, much needed to guide tuning for cross species inference. Many algorithms are evaluated using simulations, which may fail to capture real-world scenarios. This gap presents a number of problems: it is difficult to optimize algorithms if we do not know which choices lead to better results; performance may be sensitive to factors that are subject to change, such as ontology structure or annotation completeness. We will develop a modular Phenotypic Inference Evaluation Framework, PhEval and use it to optimize our own algorithms, as well as deliver it as a community resource.
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
File details
Details for the file pheval-0.3.8.tar.gz.
File metadata
- Download URL: pheval-0.3.8.tar.gz
- Upload date:
- Size: 4.1 MB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/5.1.0 CPython/3.9.19
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | b448827eeee58583d91f67cfa89411a482a0bab19dc574f243ae2a317ad7bf50 |
|
| MD5 | 1a5053fe654234bd251c986330bcb748 |
|
| BLAKE2b-256 | 7d8a9a139fc859dad929b8c22620178657138915837565b425e53e35310e6fb4 |
Provenance
File details
Details for the file pheval-0.3.8-py3-none-any.whl.
File metadata
- Download URL: pheval-0.3.8-py3-none-any.whl
- Upload date:
- Size: 4.2 MB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/5.1.0 CPython/3.9.19
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 97936542f5317032f48b7def7e2af3da50c95008f81807bdbaa62ba6793bf0d5 |
|
| MD5 | 5c694f2f71c15c55fb7f501d0be9eb1b |
|
| BLAKE2b-256 | 96102a996bc7244fd1eadb92bdae45c5c0bb8d6007f25b3ed9bd7888585e36cc |
