Package for annotating the data with types (e.g. cell types).

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  • License: GNU General Public License v3 or later (GPLv3+) (GPL3+)
  • Author: Bioinformatics Laboratory, FRI UL
  • Maintainer: Primoz Godec
  • Tags annotator, annotation, points, data
  • Requires: Python >=3.6
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Project description

point-annotator

This package provides functionalities to annotate data with labels based on the Mann-Whitney U test and Hypergeometric test. Currently, we provide examples of the fast annotation of gene expression data with the cell types based on marker genes.

Installation

The package is available at PIP and is installed with

pip install point-annotator

Build the documentation

For building the documentation one needs to have sphinx python package installed.

cd docs
make hmtl

After build the documentation is available in the _build directory.

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for primozgodec from gravatar.com primozgodec

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: GNU General Public License v3 or later (GPLv3+) (GPL3+)
  • Author: Bioinformatics Laboratory, FRI UL
  • Maintainer: Primoz Godec
  • Tags annotator, annotation, points, data
  • Requires: Python >=3.6
Classifiers

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2.0.0

This version

1.0.0

0.1.1

0.1.0

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