Parquet-based serialization for scverse
Project description
pqdata
Experimental Parquet-based I/O for scverse data structures.
Installation
pip install pqdata
# or
pip install git+https://github.com/gtca/pqdata
[!WARNING] This package is experimental, and API can change between versions as well as the file structure.
Motivation
TODO
Features and integrations
TODO
I/O
Example notebook. I/O with pqdata works like this:
from pqdata import write_anndata, write_mudata
write_anndata(adata, "pbmc3k_anndata.pqdata")
write_mudata(mdata, "pbmc5k_citeseq_mudata.pqdata")
from pqdata import read_anndata, read_mudata
adata = read_anndata("pbmc3k_anndata.pqdata")
mdata = read_mudata("pbmc5k_citeseq_mudata.pqdata")
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