A Python package to download PDFs from OA publications in PubMed
Project description
A Python package to download PDFs from OA publications in PubMed. The underlying code is forked from https://github.com/billgreenwald/Pubmed-Batch-Download. Downloaded files are located by default in your personal folder under the ‘pubmed2pdf’ directory.
Installation
pubmed2pdf can be installed from PyPI with the following command in your terminal:
$ python3 -m pip install pubmed2pdfThe latest code can be installed from GitHub with:
$ python3 -m pip install git+https://github.com/ddomingof/PubMed2PDF.gitFor developers, the code can be installed with:
$ git clone https://github.com/ddomingof/PubMed2PDF.git
$ cd PubMed2PDF
$ python3 -m pip install -e .How to Use
PubMed2PDF works by simply typing the list of PubMed identifiers in your command line interface or reading them from a file.
Example from file:
$ python3 -m pubmed2pdf pdf --pmidsfile="/my/path/to/the/file"$ python3 -m pubmed2pdf pdf --pmids="123, 1234, 12345"Run the help command to see all functionalities
$ python3 -m pubmed2pdf pdf --helpRelease history Release notifications | RSS feed
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