pybel-git 0.1.0

Using GitHub and Travis-CI

To configure Travis-CI to evaluate the BEL files that have changed in the latest commit to a in a GitHub repository on each commit, the following travis.yml file can be used:

sudo: false
cache: pip
language: python
python:
  - '3.7'
install:
  - pip install pybel-git
script:
  - pybel-git ci

Currently, the build doesn’t use a cached resource file, so this job might take a long time. The travis_wait command can be used so the script reads travis_wait 30 pybel-git ci and the job will be allowed to run for thirty (30) minutes.

An example repository can be found at https://github.com/cthoyt/pybel-git-test. An example build for this repository can be found at https://travis-ci.com/cthoyt/pybel-git-test/builds/87612373.

Using GitLab with GitLab CI/CD

To configure GitLab CI/CD to evaluate the BEL files that have changed in the latest commit to a GitLab repository, the following .gitlab-ci.yml can be used:

test:
  image: python:3.7
  script:
    - pip install pybel-git
    - pybel-git ci

As with GitHub/Travis-CI, this configuration does not use a cached resource file. GitLab CI/CD doesn’t seem to offer a wait time, but it might also not have an issue with timing out, either.

An example repository can be found at https://gitlab.com/cthoyt/pybel-gitlab-example. An example build for this repository can be found at https://gitlab.com/cthoyt/pybel-gitlab-example/-/jobs/113454179

Using Atlassian BitBucket with Bitbucket Pipelines

To configure a BitBucket Pipelines to evaluate BEL files that have been changed in the latest commit to a BitBucket repository, the following bitbucket-pipelines.yml ca be used:

image: python:3.7

pipelines:
  default:
    - step:
        caches:
          - pip
        script:
          - pip install pybel-git
          - pybel-git ci

An example repository can be found at https://bitbucket.org/pybel/pybel-bitbucket-example. An example build for this repository can be found at https://bitbucket.org/pybel/pybel-bitbucket-example/addon/pipelines/home#!/results/2.