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Tools for using BEL documents in python

Project description

PyBEL Tools is a suite of tools built on top of PyBEL to facilitate data management, integration, and analysis. For further examples, see the PyBEL Notebooks repository.

Citation

If you use PyBEL and PyBEL Tools in your work, we ask that you please cite:

Hoyt et al., 2017. PyBEL: a computational framework for Biological Expression Language. Bioinformatics, btx660, https://doi.org/10.1093/bioinformatics/btx660

Installation Current version on PyPI Stable Supported Python Versions Apache 2.0 License

PyBEL Tools can be installed easily from PyPI with the following code in your favorite terminal:

$ python3 -m pip install pybel_tools

or from the latest code on GitHub with:

$ python3 -m pip install git+https://github.com/pybel/pybel-tools.git@develop

Documentation and Examples

Acknowledgements

This package was originally developed as part of the master’s work of Charles Tapley Hoyt at Fraunhofer SCAI with partial support from the IMI projects: AETIONOMY and PHAGO.

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