Python wrapper for the Hector simple climate model
Project description
pyhector is a Python interface for the simple global climate carbon-cycle model Hector.
pyhector makes the simple climate model Hector easily installable and usable from Python and can for example be used in the analysis of mitigation scenarios, in integrated assessment models, complex climate model emulation, and uncertainty analyses.
Hector is written in C++ and developed at the Pacific Northwest National Laboratory. The model description is published in
Hartin, C. A., Patel, P., Schwarber, A., Link, R. P., and Bond-Lamberty, B. P.: A simple object-oriented and open-source model for scientific and policy analyses of the global climate system – Hector v1.0, Geosci. Model Dev., 8, 939-955, doi:10.5194/gmd-8-939-2015, 2015.
See the Hector repository and wiki for further information.
The Python interface pyhector is developed by Sven Willner and Robert Gieseke at the Potsdam Institute for Climate Impact Research.
Pyhector uses pybind11 to wrap Hector’s API. The version of Hector used can be read using Pyhector’s __hector_version__ field.
Installation
Prerequisites
Hector requires Boost, so to install and use pyhector you need to have the filesystem and system modules of Boost version 1.52 or later installed (see also the Hector build instructions).
On Ubuntu/Debian these can be installed by invoking
sudo apt-get install libboost-filesystem-dev libboost-system-devOn macOS Boost is available through the Homebrew package manager, it might be advisable to use a Homebrew installed Python for installing pyhector:
brew install boostWindows is (as Hector) in principle supported but not yet tested for pyhector. Pull request with installation notes for Windows are welcome.
Install using pip
You can simply install pyhector from PyPI by invoking
pip install pyhectorUsage
This repository also contains a Jupyter Notebook you can run live and experiment with, courtesy of the Binder project. The notebook can be viewed as a static version using nbviewer.
Basic example
import pyhector
output = pyhector.run(pyhector.rcp26)Advanced example
import pyhector
from pyhector import rcp26, rcp45, rcp60, rcp85
import matplotlib.pyplot as plt
for rcp in [rcp26, rcp45, rcp60, rcp85]:
output = pyhector.run(rcp, {"core": {"endDate": 2100}})
temp = output["temperature.Tgav"]
# Adjust to 1850 - 1900 reference period
temp = temp.loc[1850:] - temp.loc[1850:1900].mean()
temp.plot(label=rcp.name.split("_")[0])
plt.title("Global mean temperature")
plt.ylabel("°C over pre-industrial (1850-1900 mean)")
plt.legend(loc="best")
plt.show()
Development
For local development you can clone the repository, update the dependencies and install in a virtual environment with pip.
git clone https://github.com/openclimatedata/pyhector.git --recursive
cd pyhector
python3 -m venv venv
./venv/bin/pip install --editable .To update pyhector and all submodules you can run
git pull --recurse-submodules
git submodule update --init --recursive
./venv/bin/pip install --editable .Tests can be run locally with
python setup.py test
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