Python Systems Biology modeling framework

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  • License: BSD License
  • Author: Jeremy Muhlich
  • Tags systems, biology, model, rules
  • Requires: Python >=3.6
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Project description

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Python Systems Biology modeling framework

http://pysb.org/

PySB (pronounced “Pie Ess Bee”) is a framework for building rule-based mathematical models of biochemical systems. It works nicely with scientific Python libraries such as NumPy, SciPy and SymPy for model simulation and analysis.

Installation

PySB depends on the following:

For full instructions, see the Installation chapter of the manual at http://docs.pysb.org/en/latest/installation.html

Documentation

The manual is available online at http://docs.pysb.org/. You can also generate the documentation locally by installing Sphinx and running the following commands:

$ cd doc
$ make html

Then open _build/html/index.html in your web browser.

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for alubbock from gravatar.com alubbock Avatar for jmuhlich from gravatar.com jmuhlich

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: BSD License
  • Author: Jeremy Muhlich
  • Tags systems, biology, model, rules
  • Requires: Python >=3.6
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